Gene Bfae_16790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_16790 
Symbol 
ID8400225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand- 
Start bp1884879 
End bp1885370 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content69% 
IMG OID644997744 
ProductN-formylmethionyl-tRNA deformylase 
Protein accessionYP_003155093 
Protein GI257068838 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0242] N-formylmethionyl-tRNA deformylase 
TIGRFAM ID[TIGR00079] peptide deformylase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0288836 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCATCC GGCCCATCCG CATCGTCGGC GATCCGGTGC TGCGCACTCC CTGCGACCCG 
ATCCGCACCA TCACCGAGGG CACCCGCACC CTCGTGCGCG ACCTCAAGGA CACCGTCGAC 
GACGAAGGCC GCGCCGGCGT CGCGGCGAAC CAGATCGGCG TGAACCTGCG CGCCTTCTCC 
TGGCACTTCG TGGAGACCGG GGAGATCGGC TGCATCCTCA ACCCCGTGAT CGTCGAGCTC 
TCCGAGGAGC TGCAGCACGA TGATGAGGGC TGCCTCTCCG TGCCCGGGCT CTTCTACCCG 
CGCACCCGCT CGGCCTACGC CCGCTGCGTC GGCATGGACG TCGAGGGCGA GGAGATCGAG 
CTGGCGGGGG AGGGGCTCGT GGCCCGCCTC ATCCAGCACG AGGTGGGCCA CCTCGACGGC 
GAGCTCTACA TCGACGGCCT CGAGCGCTCC GTGAAGAAGC GCGCGTTGCG CCAGATCAGG 
GAGACCCTCT AA
 
Protein sequence
MTIRPIRIVG DPVLRTPCDP IRTITEGTRT LVRDLKDTVD DEGRAGVAAN QIGVNLRAFS 
WHFVETGEIG CILNPVIVEL SEELQHDDEG CLSVPGLFYP RTRSAYARCV GMDVEGEEIE 
LAGEGLVARL IQHEVGHLDG ELYIDGLERS VKKRALRQIR ETL