Gene Bfae_16220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_16220 
Symbol 
ID8400168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp1827666 
End bp1828853 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content76% 
IMG OID644997687 
ProductZn-dependent protease 
Protein accessionYP_003155039 
Protein GI257068784 
COG category[R] General function prediction only 
COG ID[COG1994] Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.276827 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGACGA GCCCGACGGT GCGACTCGGT CCGCTGCCGC CGCTCCAGAT CAGCCCGGCC 
ACCCTGATCA CGGTGGCGCT GTTCGCGGTG CTGATGTACC CGGCCCTCGC CCGCGACGGG
GCCCCGGCCA CCACGGTGGC GCCGCTGGCG ATCGGCATCG GGCTGTTCAT GATCGTCTCG
GTGCTGGTGC ACGAGGCCGC CCACGCGCTG GTCGCCCGGG CCTTCGGCGC CTCCATCGAC
CACATCGCCC TGACCCTGTG GGGAGGGCAC ACCCAGTACC GCTCCCGCGA CATGTCCGCG
CTCGGCTCGG TGCTCGTCTC CCTCTCGGGC CCGGCGGCGA ACCTGATGTT GGCGGGGCTC
GCCCGCGGCC TCGAGCAGGT GCTCGTCCCC GGCGGTGCCG CGGCGGTGTT CTTCTCCGTC
AGCGCCTGGC TGAACCTGGT CCTGGCGATC TTCAACCTGC TGCCCGGGCT GCCGATGGAC
GGCGGGCGCG CCCTCGAATC GATCCTCGGC GCGGTGCTCG GGGATCCGCT GCGCGGCACC
CGCATCACCG CGTGGATCGG GCGCCTGCTG GCCGCAGCGG TGATCGTCCT GCCGCTGTGG
CGGATCCTCG AGGCCGGTGG GGCGGGCAGC ATCTCCCTGC TCACGCTGGT CTGGGCGCTG
CTGATCGCCG GGATGCTCTG GCAGGGCGCG ACCCGCGCCC TGCACGGCGC CGCGCTCGGG
GCGCGCATCC GCACCCTCGA CGCCGCCGGC CTCGCCACCC CGCTGCGGAT CGTGGACGCC
CAGCTGCCCT TGGCGGCCCT CGACGCGGCG GGCCCGCACC CCGCCGCGGC CCCGACGACA
CCGACCGCTC CGTCCACATC GATCGCTCAG GCCGCGTCAC CGGATCTGGA CTCCTTCCTG
GTCCTCGACC GCAGCGCGGC CCGCGCCGGT CTCGTCGGCC GGGCCGCCCG GATCGATCCC
GCAGCGGCCG CGGCGGTGCC GGCCCCGCAG CGGGCCGCGA CCCCGGTGGC CGCGGTGGCC
CGCACGATCG GCGACCTCGG CGCCCTGCCC GCCACGCTGC GGGGCGACGC GCTGATCGAC
GCGATGCTCT CCCGTCCGGC CCCCGCCTAC CTCGTCCTCG GCGAGGACGG CGCCGCCCGC
GGTGTGATCA TGAGCGCGGA TGTCAACGCG CTCCTGCGCG GACGGTGA
 
Protein sequence
MMTSPTVRLG PLPPLQISPA TLITVALFAV LMYPALARDG APATTVAPLA IGIGLFMIVS 
VLVHEAAHAL VARAFGASID HIALTLWGGH TQYRSRDMSA LGSVLVSLSG PAANLMLAGL
ARGLEQVLVP GGAAAVFFSV SAWLNLVLAI FNLLPGLPMD GGRALESILG AVLGDPLRGT
RITAWIGRLL AAAVIVLPLW RILEAGGAGS ISLLTLVWAL LIAGMLWQGA TRALHGAALG
ARIRTLDAAG LATPLRIVDA QLPLAALDAA GPHPAAAPTT PTAPSTSIAQ AASPDLDSFL
VLDRSAARAG LVGRAARIDP AAAAAVPAPQ RAATPVAAVA RTIGDLGALP ATLRGDALID
AMLSRPAPAY LVLGEDGAAR GVIMSADVNA LLRGR