Gene Bfae_15320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_15320 
Symbol 
ID8400079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp1727601 
End bp1728710 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content75% 
IMG OID644997598 
Productprephenate dehydrogenase 
Protein accessionYP_003154951 
Protein GI257068696 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0287] Prephenate dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.218045 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCTCCC TGGTGCCCTC GCCCGTGCGG ATCATCGGCA CCGGCCTCAT CGGCGGGTCC 
CTCGGGATGG CGCTGAGCGA TGCCGGGGTC GAGGTGCAGG TGGAGGACGT CTCCCCGGGC
ACGGCCGCGC TGGCGGTCGA GCTCGGCGTG GGCGCCCTCG CGGAGGAGGA GTCCCCGGCT
CCGGCCCTGG TGCTCGTCGC CGCCCCGCCC GATGTCGCCG CAGCCCTCCT CGCCCGGGCG
CTGCGCACCT GGCCCGAGGC GGTGGTCGCC GATGTCGCGA GCGTGAAATC CACGGTGCTC
GACGGGCTGC GCGGCCAGAC CAGCCCCGAG GACCTGCGGC GCTACATCGG CGCCCATCCG
ATGGCCGGGC GCGAGGTCTC CGGCGTGATC GCCGCCCGCG CCGATCTCTT CCTGGGCCGG
CCCTTCGTGG TGGTCCCGCA CGAGACCACC ACGCCGGACG CGGTGAGCGC GCTGCGCGGG
CTGGCCACCG AGATCGGCTC CGTGCCCACC ACGATGGACG CCGCCGCGCA CGACATCGCC
GTCGCCCACG TCTCGCACGT GCCGCAGGTG ATGGCCAGCA TGCTCGCCGC CACCCTGCTC
GAGCCCTCCG AATCCGCGCT CGGCCTCGCC GGGCAGGGGC TGCGCGACAC CACGCGCATC
GCCGACTCCG ATCCGCGGCT CTGGGTCGAG ATCCTCGGCG CCAACGCGAG CGCCGTCGCA
CAGGTGCTCG GCGGGGTGCG GGAGCATCTC GACGAGGTGA TGGCGGCGCT CGAGACCCTG
CAGGGCGATC CCGATCCGGG CACCGGCTCC CGGCGCGCCC TCGCCGCCCT CGTCGCCGAG
GGCAACCGCG GGGTGCGCCG CATCCCCGGC AAGCACGGCG GCGCGACGGA CGCCTTCGCC
ACGGTCGTGG TGCTGGTCCC GGACCGCCCC GGCGAACTCG CCCGCCTGCT CACCGAGATC
GGGCAGATCG GCGTGAACCT CGAGGACCTC CGGCTCGAGC ACGAGCTCGG CAGGGCCGTC
GGCCTCGCGC ACATCGCGAT CGACGCCGCC CGTGAGGACC TCCTCACGCG GGAGCTCACC
GAACGCGGCT GGAGGGTCGC GGACGCCTGA
 
Protein sequence
MTSLVPSPVR IIGTGLIGGS LGMALSDAGV EVQVEDVSPG TAALAVELGV GALAEEESPA 
PALVLVAAPP DVAAALLARA LRTWPEAVVA DVASVKSTVL DGLRGQTSPE DLRRYIGAHP
MAGREVSGVI AARADLFLGR PFVVVPHETT TPDAVSALRG LATEIGSVPT TMDAAAHDIA
VAHVSHVPQV MASMLAATLL EPSESALGLA GQGLRDTTRI ADSDPRLWVE ILGANASAVA
QVLGGVREHL DEVMAALETL QGDPDPGTGS RRALAALVAE GNRGVRRIPG KHGGATDAFA
TVVVLVPDRP GELARLLTEI GQIGVNLEDL RLEHELGRAV GLAHIAIDAA REDLLTRELT
ERGWRVADA