| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_13980 |
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| Symbol | |
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| ID | 8399945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Brachybacterium faecium DSM 4810 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013172 |
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| Strand | + |
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| Start bp | 1572344 |
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| End bp | 1574329 |
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| Gene Length | 1986 bp |
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| Protein Length | 661 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644997465 |
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| Product | protein-export membrane protein SecD |
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| Protein accession | YP_003154819 |
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| Protein GI | 257068564 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0342] Preprotein translocase subunit SecD |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGCAC GTCGCATCGC CCTGGCGGCC CTCGCGGTGC TGATCCTGCT GCTGGGCGGC
GGGATCGGTG CCGGAGTCTC GAAGGGCGGC TGGGAGCCGG CTCCCAAGCT CGCCCTCGAC
CTCGAGGGCG GCACCCAGAT CATCCTGCAG GCGCAGTCGC GCGACGGCTC CGCGATCGAC
TCCGCCGCGA TGGAGCAGGC CCGGCAGATC ATGAGCCAGC GCATCAACGC GATGGGCGTG
GCGGAGACAG AGATCACCGT GCAGGGCGGC ACGAACATCG TCATCGACGT GCCCGGCCAG
CTCGACCAGG CGACCTCCCA GGCGATCCGG CAGACGGCGG CGATGTCGTT CCGCCCCGTG
CTGGCGATGA TCGCTCCCGA GGGCGCGGAG GAGGCGCAGC CCTCCGACGG CGGCGGCGAG
GCCTCGGACG GCGGGGGAGA GGCCGCGGAG CCCTCCGATG CGGGAGGGGG CGCCGATGAG
GAGACCTCCG AGGAGCCCGC CGACCCCTCG CAGCACGTCT TCGACGGGCT CGTCGGCGAG
GATCCGGACT CGGCGCCGTC GGCCGCCCCG GCCGAGGGCG AGCTGCCCTA TCCGGCCTGG
GCCATGGACT GGCTCACGCC CGAGATCGAG TCCGAGCTGA TGAGCGCCGA CTGCGTCGAC
CCCGCGGCGC AGCAGGAGAA GGTCGCCGAC GCGGCGGCCG ATGAGCCCGT GGTCGCCTGC
GACCCGGACG GCTCGGTGAA GTACCTGCTG GGGCCCGAGG TCGTCGCCGG TGCTGCGATC
GCGAGCTCCT CGGTCTCCGC CGACGTCACC CCCACCGGTC AGGCCACCGG CTACTACGTG
GTGAACATGG GCTTCACCGG GGAGGGCGGT CAGGCCTTCG GCGAGATGAC CACCGCGCTC
TACAACGGCG AGGGCGCCAC CGGCGCCTTC GGGATCGTCC TGGACGGCCT GGTGATCTCC
GCTCCCGAGG TGCAGGGCGC GACCACCAAC GGCGAGGCCC AGATCTCCGG CAACTTCTCC
CAGGAGGAGG CGAGCCAGCT CTCCGACCAG CTGCGCTTCG GCGCCCTGCC CCTCGAGTTC
GAGGTCGCCT CCGAGCAGCA GATCTCGGCG ACGCTCGGCG CGGACCAGCT CGAGATGGGC
ATGATCGCCG GCCTCATCGG GCTCGCGCTC GTGGTCCTCT ACGCGGTGGG CCAGTACCGG
CTGCTCGCGA TGGTGACCAC GGCGAGCCTG GCCATCATGG GGCTGCTCAC CTACGGCACG
CTCACCGTCC TGTCGAACAT CCCCGAGATC GGGTACCGGC TCTCGCTCGC GGGGGTGGTC
GGGCTGATCG TGGCGATCGC GTTCACCGCG GACTCCTTCA TCGTGTACTT CGAGAGGGTG
CGGGACGAGA TCCGCGAGGG CAGGGGGATC GTCGCCGCGG TCGACCACGG CTGGGATCGC
GCCAAGCGCA CCATCCTCGC CTCCGATGCT GTCAACCTCA TCGCCGCAGT GGTGCTGTAT
CTGCTGTCCA CCGGCGGCGT GCGCGGCTTC GCCTTCGTGC TCGGCCTGAC CACCGTCCTC
GATCTGGTCG TCGTGTTCCT GTTCACGCAC CCGGTGCTGC AGGCGCTGGT GCGCACCCGC
TTCTTCGGCA AGGGGCACCC GCTCAGCGGC CTGGACCCGG CGCGGCTCGA CCGCGACGTG
CCGGCCTACG CCGGCCGGGG CCGGGTGCGC CCCGTCGGCC AGCGTGGCGG GCTCGCCGCG
GAGGACCCCG CCCTCGGGGG GCGCGAGCCG ATCGCGGTGC GCCGCGCCCG GCTCGAACGG
GAGGCCGCCG CCCGCGCCGC AGCCGACGGC CCGGGCTCTG CCGACGGTCC TGAGCCCGAG
GACGGTCCTG AGCCCGAGGA CGGTCCTGAA CCCACGGATG GCCCCGATCC TGCGGGCGGT
CCTGGATCCG CCGAGGGCGC CGACGGACCC GACGGCGCCG ACGACACCGA GGAGCAGAGC
CGATGA
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| Protein sequence | MPARRIALAA LAVLILLLGG GIGAGVSKGG WEPAPKLALD LEGGTQIILQ AQSRDGSAID
SAAMEQARQI MSQRINAMGV AETEITVQGG TNIVIDVPGQ LDQATSQAIR QTAAMSFRPV
LAMIAPEGAE EAQPSDGGGE ASDGGGEAAE PSDAGGGADE ETSEEPADPS QHVFDGLVGE
DPDSAPSAAP AEGELPYPAW AMDWLTPEIE SELMSADCVD PAAQQEKVAD AAADEPVVAC
DPDGSVKYLL GPEVVAGAAI ASSSVSADVT PTGQATGYYV VNMGFTGEGG QAFGEMTTAL
YNGEGATGAF GIVLDGLVIS APEVQGATTN GEAQISGNFS QEEASQLSDQ LRFGALPLEF
EVASEQQISA TLGADQLEMG MIAGLIGLAL VVLYAVGQYR LLAMVTTASL AIMGLLTYGT
LTVLSNIPEI GYRLSLAGVV GLIVAIAFTA DSFIVYFERV RDEIREGRGI VAAVDHGWDR
AKRTILASDA VNLIAAVVLY LLSTGGVRGF AFVLGLTTVL DLVVVFLFTH PVLQALVRTR
FFGKGHPLSG LDPARLDRDV PAYAGRGRVR PVGQRGGLAA EDPALGGREP IAVRRARLER
EAAARAAADG PGSADGPEPE DGPEPEDGPE PTDGPDPAGG PGSAEGADGP DGADDTEEQS
R
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