Gene Bfae_13960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_13960 
Symbol 
ID8399943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp1570648 
End bp1571709 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content75% 
IMG OID644997463 
ProductHolliday junction DNA helicase subunit RuvB 
Protein accessionYP_003154817 
Protein GI257068562 
COG category[L] Replication, recombination and repair 
COG ID[COG2255] Holliday junction resolvasome, helicase subunit 
TIGRFAM ID[TIGR00635] Holliday junction DNA helicase, RuvB subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.577435 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGGCG AGCCGACCGC CGATGCCGAG AGCCCCTCGG TGACGAGTCC GGAGGCGGTG 
CCGCCGGAGC GCACCGCGGA GGCGGCCCTG CGGCCGCGCC GGCTCGACGA GTTCGTCGGC
CAGCAGGTGG TGCGCGATCA GCTCTCGCTG GTCCTGGACG CCGCCTCGGC GCGGGGCCGC
GCCCCCGAGC ACATGCTGCT CTCCGGCCCG CCCGGGCTCG GGAAGACGAC CCTCGCGATG
ATCATCGCCG CGGAGCTGTC GGTGCCGCTG CGGATCACCT CGGGGCCGGC GATCCAGCAC
GCCGGGGATC TCGCCGCCAT CCTCTCCTCG CTCGACGAGG GCGAGGTGCT GTTCATCGAC
GAGATCCATC GCCTGGCCCG CCCCGCCGAG GAGATGCTCT ACATCGCGAT GGAGGACTTC
CGGGTCGACG TCGTGGTGGG CAAGGGAGTC GGAGCCACCT CGATCCCGCT GGACCTGCCG
CCGTTCACCG CCGTCGGTGC CACCACCCGC GCCGGCCTGC TGCCGGCACC GCTCCGCGAC
CGCTTCGGCT TCATCGGCCA CCTCGACTTC TACGGCGCCC AGGAGCTGCG GGAAGTCGTC
CACCGCTCCG CCGCGCGGCT CGAGGTCGAG CTCGACGAAC CGGCGGCCGT GGAGATCTCC
ACCCGGTCGC GGGGCACGCC GCGCATCGCC AACCGGCTGC TGCGGCGGGT GCGGGACTGG
GCCCAGGTGC GAGGCAGCGG CCGACTGGAT CTCGCCGCCG CGAAGGAGGC GCTGCGCGTC
TACGAGGTCG ACGAGCGCGG CCTGGACCGA CTCGACCGGG CCGTTCTCTC CGCCCTGTGC
GGGCGCTTCT CCGGCGGGCC GGTGGGCCTG TCCACCCTCG CCGTGGCGGT GGGGGAGGAG
ACCGAGACCG TGGAGACCAT GGTCGAGCCG TACCTGGTGC GCGAGGGCTT CCTGCTGCGC
ACCCCGCGGG GGCGGGCCGC GGCGCCGGCG GCGTGGACCC ATCTGGGCCT CGAACCGCCC
GAGGGGCCGG AGGGCACCGC CCCGATGCTC GGCAGGTTCT GA
 
Protein sequence
MTGEPTADAE SPSVTSPEAV PPERTAEAAL RPRRLDEFVG QQVVRDQLSL VLDAASARGR 
APEHMLLSGP PGLGKTTLAM IIAAELSVPL RITSGPAIQH AGDLAAILSS LDEGEVLFID
EIHRLARPAE EMLYIAMEDF RVDVVVGKGV GATSIPLDLP PFTAVGATTR AGLLPAPLRD
RFGFIGHLDF YGAQELREVV HRSAARLEVE LDEPAAVEIS TRSRGTPRIA NRLLRRVRDW
AQVRGSGRLD LAAAKEALRV YEVDERGLDR LDRAVLSALC GRFSGGPVGL STLAVAVGEE
TETVETMVEP YLVREGFLLR TPRGRAAAPA AWTHLGLEPP EGPEGTAPML GRF