Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bfae_13430 |
Symbol | |
ID | 8399890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brachybacterium faecium DSM 4810 |
Kingdom | Bacteria |
Replicon accession | NC_013172 |
Strand | + |
Start bp | 1507126 |
End bp | 1510761 |
Gene Length | 3636 bp |
Protein Length | 1211 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644997410 |
Product | transcription-repair coupling factor Mfd |
Protein accession | YP_003154773 |
Protein GI | 257068518 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0858576 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCAC AGACCACCGC CCCCCGCCCC ACGACCGCCG AGGCCCCGCT GCGCCCGCTG CTGGACCAGC TCGCGCGCGG GCGCGACCTC ACCGCGGTCC GCGACCTGGT CGAGGCCGGC GCCGAGTCCG GGGAGGGCGG CAGCATCGTC GCCGCCACCG GGCTGTTCCC CTTCCTCGTG GCGGACCTCG CCCGCCGCGC CACCGCCGAG CAGCCGCTCG TGATCGTCAC CGCGACCACC CGCGCGACCG AGGACCTGCG CGCGGCGCTG TCGGCGCTCG TCGGCACCGA GCATCTGGTG GAGCTGCCCG CCTGGGAGAC GCTGCCCCAC GAACGGCTCT CCCCGCGCGC CGACACCGTC GCCAAGCGGC TGTCGACCCT GCGCCGGATC GCCCATCCGG AGAGCGAGGA CCCGGCGCAC GTGGTGCTCA TGCCGGTGCG CTCGCTGCTG CAGCCGATCG CCAAGGGCCT GGGCGAGCTG CGCCCGGTGC GCGCCGCGGT GGGGGACACC TACCCTCTCG AGGACCTCGA GCGCGACCTC ACGGGCGCCG CCTACGCGCG GGTGGACATG GTCGAGAAGC GCGGCGAGTT CGCCGTGCGC GGCGGCATCC TGGACGTCTT CCCGCCCACC GAGCCGCATC CGGTGCGCGT GGACCTCTTC GGCGACGAGA TCGACGACGT GCGGTACTTC TCCGTCGCCG ACCAGCGCTC CCTGGACCCC GCCCCCCGGG GCCTGGACGC CCCGCCCTGC CGCGAGATCC TCCTGACCCC CGCGGTGCGC GAGCGCGCCC GCGCCCGCGC CGAGGAGCTG CCCGGCGTGC GCGACCTGCT GCTGCGGATC GCCGACGGCA TCGCGGCCGA CGGCATGGAG TCGCTCAGCC CGGTCCTCGT CGACGGCATG GAGCAGGTCG CCGACGTGCT CCCGGCCGGT GCCCGCTTCC TCGTGATCGA CCCCGAGAAG GCCCGCGCCC GGGCCGACGA GCTGGTCGCC ACCACCGACG AGTTCCTCGC CGCCGCCTGG TCCAGCGCCG CCGCCGGCGG CGGGCTGCCG ATCGACGTCG GCGCGGCGAG CTTCGTGCCG CTGTCCGAGG CGAAGGGCCA CGCCCGCGAG GGCGGACGGC CCTGGTTCAC CCTGGCCGCC TTCGGGCTGG ACACGGACGT CGACCTCACC ACGTCCTCCA CCACGCATCC GGGCTACTCC GGGAAGCCGG GGGACGCCGC GAAGGACCTC GAGCGCCGCC GCGCCGAGGG CTGGTCGGTG CTGTCCACGA TGGTCGGTCC GGGCGGGGCC CGCCACGTGG CCGAGAACCT GCGGGCCGAG GGGCTGCCGG CGGTGTTCTC CGCCGAGCTC GACGCCCCCG TGGCGCCCGG CGAGGCGGTG GTCACCGTCG GCCCCTTCGC CGAGGGGCTC GTCGACGAGG ACCTCCAGCT GATCCTGGCC GCGGAGCGGG ATCTCACCGG CAAGTCCGGG GCGCGCCGCG GCGAGGAGCG CAAGATGCCC TCGCGGCGCC GCAACGTCGT CGACCCGCTG CAGCTGCGCC CCGGGGACCA CGTCGTCCAC GCCCACCACG GCGTGGGCCG CTTCGTGGAG ATGACCCGCC GCGCCGTGGG CAGCGGTGCC AAGCGCACCA CGCGCGAGTA CCTCGTCATC GAGTACGCGC CCTCGAAGAA GGGCCAGCCC GGTGACCGCC TCTACGTGCC CAGCGACCAG CTCGACCAGG TCACCAAGTA CGTCGGCGGC GAGGAGCCGA GCGTCAACCG GATGGGCGGC GCCGACTGGG CGAAGACCAA GTCCAAGGCC CGCAAGGCGA TCCGGGAGAT CGCCGACGAG CTGGTGCGGC TGTACTCCGC TCGGCAGTCC GCGCCCGGGC ACGCCTTCGG CCCGGACACG CCGTGGCAGC GCGAGCTCGA GGACTCCTTC GAGTTCGTGG AGACCCCCGA TCAGCTGGTG ACGATCGACG ACGTCAAGGC CGACATGGAG AAGTCGGTCC CCATGGATCG CCTGATCCTC GGCGACGTCG GCTACGGCAA GACGGAGATC GCGGTCCGCG CCGCCTTCAA GGCGGTCCAG GACGGCAAGC AGGTCGCCGT GCTCGCCCCC ACCACGCTGC TCGCCCAGCA GCACCTGGAC ACCTTCGCCG AGCGCTACAC CGGCTTCCCG GTGACCGTGC GCGGGCTCTC CCGCTTCCAG AACCCGGCGG ATTCCGAGGC GACCGTCGAG GGCCTGCGGG ACGGCAGCGT GGACATCGTG ATCGGCACCC ACCGGCTGCT CACCGGCAAT GTGCGCTTCA AGGACCTGGG CCTGCTGATC GTCGACGAGG AGCAGCGCTT CGGGGTCGAG CACAAGGAGA CGCTCAAGGC GCTGCGCACC AACGTGGACG TGCTGTCGAT GTCCGCCACC CCGATCCCGC GCACCCTCGA GATGGCGGTG ACGGGGATCC GGGAGCTCTC GATCCTCGCG ACCCCGCCGG AGGAGCGCCA TCCCGTGCTC ACCTACGTCG GCGCCCAGGA GGACAAGCAG GTCACAGCAG CGATCCGCCG TGAGCTGCTG CGCGAGGGCC AGGTGTTCTA CATCCACAAC CGGGTCGAGG ACATCGACCG GGTCGCCGCG CACCTGCGCG AGCTGGTGCC CGACGCGCGG GTGCAGGTCG CCCACGGCAA GATGAACGAG CACCAGCTCG AGCGGGTCCT CATCGACTTC TGGGAGCGGG ACTTCGACGT GCTCGTGTGC ACCACGATCG TGGAGACCGG GCTGGACATC TCCAACGCCA ACACCCTCAT CGTCGAGAAT GCGGACAGGT TCGGCCTCTC GCAGCTGCAT CAGCTGCGCG GCCGCGTGGG CCGCTCGAGC GAGCGCGCCT ACGCGTACTT CCTCTACAAC GCCACCAAGC CCCTCACCGA GCTCGCGCAC GACCGCCTCA CCACGCTCGC CACCAACACC GACCTCGGTG CGGGCATGCA GGTGGCGATG AAGGACCTCG AGATCCGCGG CGCCGGCAAC CTGCTGGGCG GGGAGCAGTC CGGGCACATC GCCGGGGTGG GCTTCGACCT CTACGTGCGG ATGGTGGGGG AGGCCGTGGC GGCGTTCCGC GGCGAGGGCA GGGCGCCTGA GAAGGAGATC CGGGTCGAGC TGCCGCTGGA CGCCCACGTG CCGCACGACT ACATCGGCTC CGAACGGCTG CGGCTCGAGG CCTACTCGAA GCTCTCCGCC GTGCGCGAGG TCTCCGAGAT CGCGCAGATC CGTGCCGAGC TCACCGACCG CTACGGCACC CCGCCCGCCC CGGTCGAGGT GCTGCTGGAC GTGGCACGGT TCCGCATCGA CGCCCGCACC GCCGGGATCG ACGAGGTCCA AGCCCAGGGC AAGATGATCC GCTTCGCCCA CCTCGAGGTG CCGGACTCCG CCGCGATGCG GATGAAGCGG CTGTACCCGG GCACGGTGCT GAAGCCCGCG ATCCGTCAGG TGCTGGTGCC GCGGCCGATG ACCTCCCGCC TGGGAGGCAC GGAGCTGCGC GATCACGAGC TGCTGGAGTG GTCCCGCGAC GTGCTGCGCA CCCTCGTGCC CGCCGCCGCG GAGCAGATCT CCGCACCGAC CGTGCAGGAG ACGGACGGGG CGCAGGGCCG GGGCTCGGCG AAGTAG
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Protein sequence | MTAQTTAPRP TTAEAPLRPL LDQLARGRDL TAVRDLVEAG AESGEGGSIV AATGLFPFLV ADLARRATAE QPLVIVTATT RATEDLRAAL SALVGTEHLV ELPAWETLPH ERLSPRADTV AKRLSTLRRI AHPESEDPAH VVLMPVRSLL QPIAKGLGEL RPVRAAVGDT YPLEDLERDL TGAAYARVDM VEKRGEFAVR GGILDVFPPT EPHPVRVDLF GDEIDDVRYF SVADQRSLDP APRGLDAPPC REILLTPAVR ERARARAEEL PGVRDLLLRI ADGIAADGME SLSPVLVDGM EQVADVLPAG ARFLVIDPEK ARARADELVA TTDEFLAAAW SSAAAGGGLP IDVGAASFVP LSEAKGHARE GGRPWFTLAA FGLDTDVDLT TSSTTHPGYS GKPGDAAKDL ERRRAEGWSV LSTMVGPGGA RHVAENLRAE GLPAVFSAEL DAPVAPGEAV VTVGPFAEGL VDEDLQLILA AERDLTGKSG ARRGEERKMP SRRRNVVDPL QLRPGDHVVH AHHGVGRFVE MTRRAVGSGA KRTTREYLVI EYAPSKKGQP GDRLYVPSDQ LDQVTKYVGG EEPSVNRMGG ADWAKTKSKA RKAIREIADE LVRLYSARQS APGHAFGPDT PWQRELEDSF EFVETPDQLV TIDDVKADME KSVPMDRLIL GDVGYGKTEI AVRAAFKAVQ DGKQVAVLAP TTLLAQQHLD TFAERYTGFP VTVRGLSRFQ NPADSEATVE GLRDGSVDIV IGTHRLLTGN VRFKDLGLLI VDEEQRFGVE HKETLKALRT NVDVLSMSAT PIPRTLEMAV TGIRELSILA TPPEERHPVL TYVGAQEDKQ VTAAIRRELL REGQVFYIHN RVEDIDRVAA HLRELVPDAR VQVAHGKMNE HQLERVLIDF WERDFDVLVC TTIVETGLDI SNANTLIVEN ADRFGLSQLH QLRGRVGRSS ERAYAYFLYN ATKPLTELAH DRLTTLATNT DLGAGMQVAM KDLEIRGAGN LLGGEQSGHI AGVGFDLYVR MVGEAVAAFR GEGRAPEKEI RVELPLDAHV PHDYIGSERL RLEAYSKLSA VREVSEIAQI RAELTDRYGT PPAPVEVLLD VARFRIDART AGIDEVQAQG KMIRFAHLEV PDSAAMRMKR LYPGTVLKPA IRQVLVPRPM TSRLGGTELR DHELLEWSRD VLRTLVPAAA EQISAPTVQE TDGAQGRGSA K
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