Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bfae_12860 |
Symbol | |
ID | 8399833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Brachybacterium faecium DSM 4810 |
Kingdom | Bacteria |
Replicon accession | NC_013172 |
Strand | + |
Start bp | 1447367 |
End bp | 1449130 |
Gene Length | 1764 bp |
Protein Length | 587 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644997354 |
Product | predicted membrane protein |
Protein accession | YP_003154719 |
Protein GI | 257068464 |
COG category | [S] Function unknown |
COG ID | [COG3428] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0245605 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCGCGC CCGATCCCGA GTCCGCACCC GAGACCGCGC CCCCGGGCGA GGCCTCCTCC GATGCGGCCG GAGCACCCCG CCACCGCACG CACCCGATCA CCCCGCTGGT CACCGGCTGG AAGATCGTGG TCGGCATCAT CGCGGTGCTC ACGGCCCAGA ACATCGCCCG CCTGTTGGAG GACTTCACCC TCCAGCGAGC CCTGATCGGC CTCGCCGCCG TCGCCGCCGC AGTCGTGATC GCCATCGTGC TCTCGGCCCT CAGCTGGTGG TTCACCACCT ACGCGGTCGA TGACCACGGC GTCTCCCTCC ACCGCGGCAT GATCAGCAAG TCCCGCGAGT ACGCCCCGCG GGCCCGCATC GAATCGGTCT CCGTGGAGCG CCCGCTGCTG GCCCGGCTGC TGGGACTGGC CAAGGTGCGC GTCGAGGTCG CCGGCGGCGG GGAGTCCTAC CTGGACATCG AGTACGTGAG GTCCGCGGAC GCCGAGGAGC TGCGCCGTCG CGTGCTCGGG GTGGCGGCTC TCGCCTCCGC CCCGGAGGCC GGCCACGCCG CCGACTCCGA GCCCCGCCCC GCCGGAGCCG CACCCGCCGG GGGTACCGCC GCGGAGCAGG CCGACGTGAC CGGCGCTTCC GCCGCCCCAT GGTCCGCCGA CGGCAGGACC GCGGCAGACG CGGCACCTGC CACGACCTCG GGCGCGCACC TCACAGCCGC CGCCGCGCCC GGCGCCGACG GGGCCGCGAC GGGCTCCGGC CTCGAGTCCC TCCTCTACGA CGGGGTGACC GACGGCGAGC TGATCGCGAA GATCCCCACC GACCGCCTGG TGCGCTCGCT CCTGCGCGAC CTCGGCTTCG TGTTCGGCAC CCTCGCGAGC GTCCTCGGCG TCGGCTTCGC GATCGTGGTC GGCATCTGGC AGGAGGGGAT CAACATCGCG ATGATCATCG CCCTGTTCCC CGCGTTCATC GCCGTGCCGA AGTTCGTGTT CGGACGGATC GAATCGGGGT GGGGGTTCGT CTCCCGCATC ACCGACCGCG GACTGCGGAT GCGGCGCGGC CTGGCCAACA CCCGCACCGA CAACATCGCC TCGGGACGCA TCCAGCGCCT CGCGGTGCGG CGCCCGCTGC TGTGGCGCGC CCCGGACTGG ACCGCGGTCT CGGTCACCGT CGCGGGGATC GATGACGACA GCGAGAACGG CGCCCAGAAC GTGCTGCCCG TCGGCACACG CGACGAGCTG GGCGCCACGC TCGGGCACCT CGCCGCCCCG CTGGGCACCG CGGACGACCT CGCGACCCTC GAACACCTGC TGAGCGCTCC CGCCCCCGGC ATCGAGGGGC TGCGCAAGCC CCTGCGGCTG TACTGGATCG CACGCCGCAC CCAGGTCGCC GTGCTGCTGC CCGGCGCGCT GGTGCACCGC ACGGGGATCC TCGGCCGCTC GCTCGAGATC ATCCCCCGGG AGCGGATCCA GCACGTCAGC GTCTCGGACG GTCCGCTCAG CCGGCGCCTG GGGCTGCTCG ACCTGGAGGT CGGGGTGGCC GGCCACACCG TGCACCTCAC CAGCCTCGCC CGCTCCGACG CGCTCGCCCT GCACGCGGTG CTCGCGCGCG ACGGCCGCAC GCTGCGCCGT TACCGTGATC GTGCCCAGTG GCCCGCCCCC GTGCTCGCCG CGGCGCGCCG CTCGGCCCCC GACGAGCCGC CGGCCACGAC CCCGGCCGCC CCCGCGCAGC CGGCGCAGCC CTCCACCCCC GCGAGCCCGC AGGAGAACAG GTGA
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Protein sequence | MTAPDPESAP ETAPPGEASS DAAGAPRHRT HPITPLVTGW KIVVGIIAVL TAQNIARLLE DFTLQRALIG LAAVAAAVVI AIVLSALSWW FTTYAVDDHG VSLHRGMISK SREYAPRARI ESVSVERPLL ARLLGLAKVR VEVAGGGESY LDIEYVRSAD AEELRRRVLG VAALASAPEA GHAADSEPRP AGAAPAGGTA AEQADVTGAS AAPWSADGRT AADAAPATTS GAHLTAAAAP GADGAATGSG LESLLYDGVT DGELIAKIPT DRLVRSLLRD LGFVFGTLAS VLGVGFAIVV GIWQEGINIA MIIALFPAFI AVPKFVFGRI ESGWGFVSRI TDRGLRMRRG LANTRTDNIA SGRIQRLAVR RPLLWRAPDW TAVSVTVAGI DDDSENGAQN VLPVGTRDEL GATLGHLAAP LGTADDLATL EHLLSAPAPG IEGLRKPLRL YWIARRTQVA VLLPGALVHR TGILGRSLEI IPRERIQHVS VSDGPLSRRL GLLDLEVGVA GHTVHLTSLA RSDALALHAV LARDGRTLRR YRDRAQWPAP VLAAARRSAP DEPPATTPAA PAQPAQPSTP ASPQENR
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