Gene Bfae_12860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_12860 
Symbol 
ID8399833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp1447367 
End bp1449130 
Gene Length1764 bp 
Protein Length587 aa 
Translation table11 
GC content75% 
IMG OID644997354 
Productpredicted membrane protein 
Protein accessionYP_003154719 
Protein GI257068464 
COG category[S] Function unknown 
COG ID[COG3428] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0245605 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGCGC CCGATCCCGA GTCCGCACCC GAGACCGCGC CCCCGGGCGA GGCCTCCTCC 
GATGCGGCCG GAGCACCCCG CCACCGCACG CACCCGATCA CCCCGCTGGT CACCGGCTGG
AAGATCGTGG TCGGCATCAT CGCGGTGCTC ACGGCCCAGA ACATCGCCCG CCTGTTGGAG
GACTTCACCC TCCAGCGAGC CCTGATCGGC CTCGCCGCCG TCGCCGCCGC AGTCGTGATC
GCCATCGTGC TCTCGGCCCT CAGCTGGTGG TTCACCACCT ACGCGGTCGA TGACCACGGC
GTCTCCCTCC ACCGCGGCAT GATCAGCAAG TCCCGCGAGT ACGCCCCGCG GGCCCGCATC
GAATCGGTCT CCGTGGAGCG CCCGCTGCTG GCCCGGCTGC TGGGACTGGC CAAGGTGCGC
GTCGAGGTCG CCGGCGGCGG GGAGTCCTAC CTGGACATCG AGTACGTGAG GTCCGCGGAC
GCCGAGGAGC TGCGCCGTCG CGTGCTCGGG GTGGCGGCTC TCGCCTCCGC CCCGGAGGCC
GGCCACGCCG CCGACTCCGA GCCCCGCCCC GCCGGAGCCG CACCCGCCGG GGGTACCGCC
GCGGAGCAGG CCGACGTGAC CGGCGCTTCC GCCGCCCCAT GGTCCGCCGA CGGCAGGACC
GCGGCAGACG CGGCACCTGC CACGACCTCG GGCGCGCACC TCACAGCCGC CGCCGCGCCC
GGCGCCGACG GGGCCGCGAC GGGCTCCGGC CTCGAGTCCC TCCTCTACGA CGGGGTGACC
GACGGCGAGC TGATCGCGAA GATCCCCACC GACCGCCTGG TGCGCTCGCT CCTGCGCGAC
CTCGGCTTCG TGTTCGGCAC CCTCGCGAGC GTCCTCGGCG TCGGCTTCGC GATCGTGGTC
GGCATCTGGC AGGAGGGGAT CAACATCGCG ATGATCATCG CCCTGTTCCC CGCGTTCATC
GCCGTGCCGA AGTTCGTGTT CGGACGGATC GAATCGGGGT GGGGGTTCGT CTCCCGCATC
ACCGACCGCG GACTGCGGAT GCGGCGCGGC CTGGCCAACA CCCGCACCGA CAACATCGCC
TCGGGACGCA TCCAGCGCCT CGCGGTGCGG CGCCCGCTGC TGTGGCGCGC CCCGGACTGG
ACCGCGGTCT CGGTCACCGT CGCGGGGATC GATGACGACA GCGAGAACGG CGCCCAGAAC
GTGCTGCCCG TCGGCACACG CGACGAGCTG GGCGCCACGC TCGGGCACCT CGCCGCCCCG
CTGGGCACCG CGGACGACCT CGCGACCCTC GAACACCTGC TGAGCGCTCC CGCCCCCGGC
ATCGAGGGGC TGCGCAAGCC CCTGCGGCTG TACTGGATCG CACGCCGCAC CCAGGTCGCC
GTGCTGCTGC CCGGCGCGCT GGTGCACCGC ACGGGGATCC TCGGCCGCTC GCTCGAGATC
ATCCCCCGGG AGCGGATCCA GCACGTCAGC GTCTCGGACG GTCCGCTCAG CCGGCGCCTG
GGGCTGCTCG ACCTGGAGGT CGGGGTGGCC GGCCACACCG TGCACCTCAC CAGCCTCGCC
CGCTCCGACG CGCTCGCCCT GCACGCGGTG CTCGCGCGCG ACGGCCGCAC GCTGCGCCGT
TACCGTGATC GTGCCCAGTG GCCCGCCCCC GTGCTCGCCG CGGCGCGCCG CTCGGCCCCC
GACGAGCCGC CGGCCACGAC CCCGGCCGCC CCCGCGCAGC CGGCGCAGCC CTCCACCCCC
GCGAGCCCGC AGGAGAACAG GTGA
 
Protein sequence
MTAPDPESAP ETAPPGEASS DAAGAPRHRT HPITPLVTGW KIVVGIIAVL TAQNIARLLE 
DFTLQRALIG LAAVAAAVVI AIVLSALSWW FTTYAVDDHG VSLHRGMISK SREYAPRARI
ESVSVERPLL ARLLGLAKVR VEVAGGGESY LDIEYVRSAD AEELRRRVLG VAALASAPEA
GHAADSEPRP AGAAPAGGTA AEQADVTGAS AAPWSADGRT AADAAPATTS GAHLTAAAAP
GADGAATGSG LESLLYDGVT DGELIAKIPT DRLVRSLLRD LGFVFGTLAS VLGVGFAIVV
GIWQEGINIA MIIALFPAFI AVPKFVFGRI ESGWGFVSRI TDRGLRMRRG LANTRTDNIA
SGRIQRLAVR RPLLWRAPDW TAVSVTVAGI DDDSENGAQN VLPVGTRDEL GATLGHLAAP
LGTADDLATL EHLLSAPAPG IEGLRKPLRL YWIARRTQVA VLLPGALVHR TGILGRSLEI
IPRERIQHVS VSDGPLSRRL GLLDLEVGVA GHTVHLTSLA RSDALALHAV LARDGRTLRR
YRDRAQWPAP VLAAARRSAP DEPPATTPAA PAQPAQPSTP ASPQENR