| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_10900 |
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| Symbol | |
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| ID | 8399638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Brachybacterium faecium DSM 4810 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013172 |
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| Strand | + |
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| Start bp | 1223954 |
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| End bp | 1224880 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644997163 |
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| Product | ribosomal large subunit pseudouridine synthase D |
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| Protein accession | YP_003154528 |
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| Protein GI | 257068273 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.295076 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTCCT CCCGCCTGCT GATGGTGCCG GACGGGCTCG CGGGCGAGCG CGTGGACGTC
GGCATCTCGC GCATGCTGGG CCTGTCCCGC ACCCGCGCCG CCGATCTCGT GACCGCCGGG
CACGTGCTCG TGGACGGCCG CGCCCCCGCC CGCTCCACCC GCCTGGAGCC CGGGGTGATG
GTGCACGTCG AGCTGCCGGA CGAGAAGCCG GCCGTCGAGG TGCGCCCGCA GATCGCCGAG
GGCATGAGCC TGATCCACCA GGACGACGAC ATCGTGGTGA TCGACAAGCC CGTCGGCGTG
GCCGCGCACC CCAGCGCCGG ATGGAGCGGG CCGACGGTGC TGGGTCACCT CGCCGCCGCC
GGGGTGGAGA TCCGCACCAG CGGCGACCCG GAGCGACAGG GCATCGTCAG CCGCCTCGAC
GTGGGCACGT CCGGGTTGAT GGTGGTCGCG CGCACCGAGC GCGCCTACAC CACCCTCAAG
GACGCCTTCC GCGCCCGGGA GGTGGGCAAG GTCTACCACG CGATCTGCCA AGGCACCCCC
GATCAGCCGC GCGGCACGAT CGAGGCGCCC ATCGGCCGCT CCCCGCAGCA CGACTACAAG
TTCGCGGTGC GCGAGGACGG CAAGCACTCG GTCACCCACT ACGAGACCCT CGAGGAGCTG
CAGGGGGCGA CGCTGCTGAG GATCGGGCTC GAGACCGGTC GCACCCACCA GATCCGCGTG
CACATGTCCG CGCTGCACCA TCCGCTGGTG GGCGACCCGC TCTACGGTGC GGACCCGACG
CTCGCCGAGC GGGTGGGGCT GATCCGCCAG TGGCTGCACG CGATGGAGCT GACGTTCGTC
CATCCCGCGA CCGGGCGCGA GGTCACCTAT ACCTCGCAGT ACCCGTCGGA CCTGGCGCAG
GCGCTGGAGG CGCTGCGGGG CCGCTGA
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| Protein sequence | MSSSRLLMVP DGLAGERVDV GISRMLGLSR TRAADLVTAG HVLVDGRAPA RSTRLEPGVM
VHVELPDEKP AVEVRPQIAE GMSLIHQDDD IVVIDKPVGV AAHPSAGWSG PTVLGHLAAA
GVEIRTSGDP ERQGIVSRLD VGTSGLMVVA RTERAYTTLK DAFRAREVGK VYHAICQGTP
DQPRGTIEAP IGRSPQHDYK FAVREDGKHS VTHYETLEEL QGATLLRIGL ETGRTHQIRV
HMSALHHPLV GDPLYGADPT LAERVGLIRQ WLHAMELTFV HPATGREVTY TSQYPSDLAQ
ALEALRGR
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