Gene Bfae_08330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_08330 
Symbol 
ID8399381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp949948 
End bp950901 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content74% 
IMG OID644996909 
Productdihydrodipicolinate synthase/N-acetylneuraminate lyase 
Protein accessionYP_003154277 
Protein GI257068022 
COG category[E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.366488 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACCC CCTCCGCCCC GCTGACCGGC GTGGTCCCCC CGCTGCTGAC CCCGCTGACC 
GCCGACGGCG AGGTCGACCT GCCCTCGCTC GAGCGGCTCA TCGGCCATCT CCTGGACGGC
GGCGTCGACG GGATCTTCGC CCTCGGCTCC TCCGGCGAGG TCGCCTTCTG GGACGACGCC
CGCCGCGCGG CCGTGCTCGA GGCCGTCACC GGCACCGTCG CCGGTCAGGT GCCGGTGATC
GCCGGGGTCA TCGACATGCA GACCGACCGG GTGATCCAGC ACGTGCGCGC CGCCGAGCGC
TTCGACCTCG CCGGCTACGT GGTCACCGCC CCGTTCTACG CGATCACCGG CCCGGAGGAG
ATCGACACCC ATTTCCGGGC CGTCGCCGCC GCGACGGACC GGCCGCTGTG GGCCTACGAC
ATCCCGGTGT GCGTGCATGC CAAGCTGCCC GCCGCACAGC TGCTGCGCCT GGGCGCGGAC
GGCGTGATCA CCGGGGTCAA GGACTCCAGC GGCGACGACG TCGGCTTCCG CCGGCTCGCC
GCAGCCAACC GCGCCGCCGG CTCCCCGCTG ACGCTGCTGA CCGGCCACGA GATCGTCGTG
GACGGCGCGT ACCTCGCCGG GGCCGACGGC TCCGTGCCCG GGCTCGGCAA CGTGGACCCC
TCCGGGTACG TGCGCATGCA CCGCGCGGCG CAGGCCGGAG ACTGGGAGCA GGTGCGCGCC
GAGCAGGACC GTCTCGCCCA GCTGTTCGAG ATCGTCTTCC AGCCCACCGA CAAGGTGGGT
CCCGCCGCCG GGGTGGGCGC CTTCAAGACG GCCCTGCGCG AGCTGGGCAT CGTCGAGACC
AACACCATGG CCTCCCCGAT GACGCCGATC GAGGGCGCGG CGGTGGACCG CATCCGCGAG
ATCCTCGGCG CGACCGGGCT GCTCGACGGG GCACGGGCCG GCACGGATGC CTGA
 
Protein sequence
MSTPSAPLTG VVPPLLTPLT ADGEVDLPSL ERLIGHLLDG GVDGIFALGS SGEVAFWDDA 
RRAAVLEAVT GTVAGQVPVI AGVIDMQTDR VIQHVRAAER FDLAGYVVTA PFYAITGPEE
IDTHFRAVAA ATDRPLWAYD IPVCVHAKLP AAQLLRLGAD GVITGVKDSS GDDVGFRRLA
AANRAAGSPL TLLTGHEIVV DGAYLAGADG SVPGLGNVDP SGYVRMHRAA QAGDWEQVRA
EQDRLAQLFE IVFQPTDKVG PAAGVGAFKT ALRELGIVET NTMASPMTPI EGAAVDRIRE
ILGATGLLDG ARAGTDA