| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bfae_05610 |
|---|
| Symbol | |
|---|
| ID | 8399109 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Brachybacterium faecium DSM 4810 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013172 |
|---|
| Strand | + |
|---|
| Start bp | 650806 |
|---|
| End bp | 651399 |
|---|
| Gene Length | 594 bp |
|---|
| Protein Length | 197 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644996645 |
|---|
| Product | alkylhydroperoxidase AhpD family core domain |
|---|
| Protein accession | YP_003154017 |
|---|
| Protein GI | 257067762 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2128] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain
[TIGR01926] uncharacterized peroxidase-related enzyme |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.429163 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGCC CCGAGACCTT CACGCAGGAG AGCCTCAACT GGGTGCCGTG GCTCGAGCCC
GTCGCCCGCG AGGACCTCAC CGAGGAGCAG CACGAGGCGC TGCTGGACGA CTTCCGCCGC
GCCATGCCCT ACTTCCGGCT GCTCGCGCGG GACCCGCAGG CGCTGCTGGC CCGCACCCTC
ACCGACAAGG ACATCTTCTT CAACACCGAC GGCGGCGCGG GCCGCGCCGA GCGGGAGCTC
GCCGCCACCG CGACCTCCCG CGCCAACGGC TGCATCTACT GCGCCTCGGT CCACTCCGCC
TCCGCGACCC GCGAATCGGG ACGCGTCGAC GACGTGCAGC GCCTGCTGGA CGACGGCGTG
GGCGCGGACC TCGGCTCCGA GACCTGGAAC GCGATCGCGC ACGCCGCGGA CGTGCTCACC
CACCTGCCGC TGGACTTCGG ACCAGGTGAG ATCCAGCGCC TGCGTGCGGC GGGGCTCGAC
GATGCCGATA TCGTCGACGT GATCAACGGT GCCGCCTTCT TCCACTGGGC GAACCGTCTG
ATGCTCTCCC TCGGCGAACC CGAGGTCCCC TCTCGGAGGA AGGAGCGCTC ATGA
|
|---|
| Protein sequence | MTRPETFTQE SLNWVPWLEP VAREDLTEEQ HEALLDDFRR AMPYFRLLAR DPQALLARTL
TDKDIFFNTD GGAGRAEREL AATATSRANG CIYCASVHSA SATRESGRVD DVQRLLDDGV
GADLGSETWN AIAHAADVLT HLPLDFGPGE IQRLRAAGLD DADIVDVING AAFFHWANRL
MLSLGEPEVP SRRKERS
|
|---|
| |