Gene Bfae_00230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_00230 
Symbol 
ID8398573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand+ 
Start bp22983 
End bp23654 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content74% 
IMG OID644996121 
Productshort-chain alcohol dehydrogenase 
Protein accessionYP_003153497 
Protein GI257067242 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAGCC TCCGCACCGC CGTCGTCACC GGCGCCACCA GCGGCATCGG CCGCGAGGTC 
GCTCTCCAGC TCGCCGAGCT GGGGTGGCGC GTGATCGCGA TCGGACGCGA CCGGGAGGCT 
CTCGCAGAGC TCTCCCGCCG CTCGGAGCGC CTCGTGCCCC ATGCCGCGGA TCTGCTCACC 
GACGAGATCG AGGAGCTGAT CCCCGCACGG GTCGATGCAC TCGTCCCCGC CGCCGGCATC 
TCCCCGTCCA CCGGCGTCGA GGAGACGACC CCGGGGGAGT GGGAGCGCGT CTTCGCCCTC 
AACGTCACCG CCGGCGCCGC GCTCGCCCGC CACGCCCTGC CGGCCCTGCG TGCCGCCCGC 
GGGACGATCG TCTTCGTCAA CTCGGGAGCC GGCACCGCAG CCCGTCCGCG CAACACGCCC 
TATGCGGCGA GCAAGCATGC GCTGCGGGCG CTCGCCAACG GGCTGCGCGT CGAGGAGGAG 
GGGCACGGGG TGCGCGTCAG CACCGTCTAC CCCGGCCCCA CCGACACCCC GATGTTCGAC 
GGTGACGTCG ACCGCGCCGC GCTGATCCGC CCCGCCTCCG TGGCAGCGGC GGTGGTCATG 
GCCATCACCG CGAGCGACGA CGTGCAGCTG ACCGACATCC ACGTCCGACC CCGCCGCGAG 
CTGTCCTGGT GA
 
Protein sequence
MDSLRTAVVT GATSGIGREV ALQLAELGWR VIAIGRDREA LAELSRRSER LVPHAADLLT 
DEIEELIPAR VDALVPAAGI SPSTGVEETT PGEWERVFAL NVTAGAALAR HALPALRAAR 
GTIVFVNSGA GTAARPRNTP YAASKHALRA LANGLRVEEE GHGVRVSTVY PGPTDTPMFD 
GDVDRAALIR PASVAAAVVM AITASDDVQL TDIHVRPRRE LSW