Gene Apre_1512 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1512 
Symbol 
ID8398324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1645946 
End bp1647892 
Gene Length1947 bp 
Protein Length648 aa 
Translation table11 
GC content39% 
IMG OID644995876 
Productmethionyl-tRNA synthetase 
Protein accessionYP_003153254 
Protein GI257066998 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0143] Methionyl-tRNA synthetase 
TIGRFAM ID[TIGR00398] methionyl-tRNA synthetase
[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000547947 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGAGA AGAAAGCTTA TTACATTACA ACACCGATAT ACTATCCAAA CTCAAACTTG 
CATATCGGAA ATACTTACAC ATCAGTCATA GCAGATGTGC TCAAAAGATA TAAAAACTTA
AAGGGCTTTG ATGCCTACTT AACTACAGGA ACAGACGAAC ACGGACAAAA GATCATGAGA
ACAGCCCTAG ATGCTGGTAC TAGTCCTCAA AAGTTTGTCG ATATCATAGC GGAAGAGACA
AAAGAGCTTT GGAAAAAGCT TGAAATCGAC TACGATACCT TCATTAGGTC AACCGAAGAC
CAACACGAAA AGGATGTCGC TGAAATCTTT ACCAAACTTT ACGAGAAGGG AGATATCTAC
AAGGGAGAAT ATAAGGGATA TTATTGTACA CCTTGTGAGA CCTTCTGGAC TGAGTCTCAA
TTAGAAGATG GCCACTGCCC AGATTGCGGT AGGGAAGTAG AATATCAAGA AGAAGAAACT
TATTTCTTTA GACTTTCCAA ATATACAGAC AGATTGAAAG AGCTTTTCAA AGAACATCCA
GAATTCTTGG AGCCACAATT TAGGCAAAAG GAAATGCTAA ACAACTTCAT CGACAAGGGA
CTTTCTGACC TATCTGTTAC AAGAAATTCC TTCGATTGGG GAGTTGATGT GCCTTTTGAT
AATGAACACG TTGTCTATGT TTGGATTGAT GCCCTATCAT GCTACTTATC TGCCATAGGC
TATGGAGATG ATAAGGCTAA ATTTGAAAGA TACTGGCCTG CTGGAGTTCA TCTAATCGGA
AAAGATATAG TAAGATTTCA TACAATAATC TGGCCAGCCC TACTAATGGC CCTAGATCTT
CCACTTCCAG AGAAGGTATT TGCCCATGGT TGGATTCTTT TTGACAATGA CAAGATGAGT
AAGTCCAAGG GAAATATCAT GTATCCAGAA CCACTCGTAG ACCTTTATGG GGTAGATGCC
CTTAAATTCT ACATGCTACG TGAGTTTAAC TTTGGATCTG ACGGCAACTT CTCAGCTAGA
AAATACATGG AAAGATATAA TTCTGACCTA GTAAATGACC TAGGTAACCT AGTATCAAGA
ACTACATCAA TGATAGCTAA ATATAACGGA GGAGAAGTAA GAAAGGGAAC AGTATCAGAT
AGCTTTGATG ATGAGCTCAT CACCCTTGCA GAAGAAACTT ACACTAAGTT TAACAAGCTA
ATGGATGAGT TTAACTTTAA CGCTGCCCTT GAAGCTGTTT GGACCCTAAT TCGTCGTGCC
AACAAATACG TAGACGAGAC TGAGCCATGG ATCTTGGGTC GTGACGAAGC TAATAAAGAA
AGACTAGACA GAGTCTTATA CAATCTCGCT GAAACTATCA GAATAGTAGC CCAACTAATC
GAGCCAGTTA TGAAAAACAC AACAGCAACA ATCCTAGAAA AAATCGGCAC TGATAATAAG
GGCTTTGAAT CAGCAGGAGA GTTTGGCCTT CTTGAAGAAG GAGCTAGGGT AAGTAAGGGA
GCTAATCTAT TCGATAGACT TGACATAGAC AAGGAACTTG TTAAGCTTCA TGAGGCAAAT
GGTGCCCTTA TAGAGAAAAG ACTTAATAAG AATAAGAAGG AAGATGAAGA ATCTAAGGAA
GAATATATAG ACTTCGAAGA CTTCACCAAA GTCGACCTAG TTGTAGGTAA GATCCTAGAA
GCTAAGGAAC ATCCGAATGC AGACAAGCTC TTAGTCTTTA AGGTAGATAT AGGAGAAGAT
GAGCCAAGAA CAATAGTTTC TGGTATCAAG AAATGGTATG CTCCAGAAGA TTTATTAGGT
AAAAATGTAA TCGTCGTAAG AAATCTCGCT CCAAGGAAGA TGCGTGGAAT CGAATCTCAA
GGCATGCTTC TTGCAGCAGA CTTTGATGAT GACCTATCCC TCCTATCAAC TCTAGAAGAC
TTAAAGCCAG GAGCAAAGGT AAGCTAA
 
Protein sequence
MTEKKAYYIT TPIYYPNSNL HIGNTYTSVI ADVLKRYKNL KGFDAYLTTG TDEHGQKIMR 
TALDAGTSPQ KFVDIIAEET KELWKKLEID YDTFIRSTED QHEKDVAEIF TKLYEKGDIY
KGEYKGYYCT PCETFWTESQ LEDGHCPDCG REVEYQEEET YFFRLSKYTD RLKELFKEHP
EFLEPQFRQK EMLNNFIDKG LSDLSVTRNS FDWGVDVPFD NEHVVYVWID ALSCYLSAIG
YGDDKAKFER YWPAGVHLIG KDIVRFHTII WPALLMALDL PLPEKVFAHG WILFDNDKMS
KSKGNIMYPE PLVDLYGVDA LKFYMLREFN FGSDGNFSAR KYMERYNSDL VNDLGNLVSR
TTSMIAKYNG GEVRKGTVSD SFDDELITLA EETYTKFNKL MDEFNFNAAL EAVWTLIRRA
NKYVDETEPW ILGRDEANKE RLDRVLYNLA ETIRIVAQLI EPVMKNTTAT ILEKIGTDNK
GFESAGEFGL LEEGARVSKG ANLFDRLDID KELVKLHEAN GALIEKRLNK NKKEDEESKE
EYIDFEDFTK VDLVVGKILE AKEHPNADKL LVFKVDIGED EPRTIVSGIK KWYAPEDLLG
KNVIVVRNLA PRKMRGIESQ GMLLAADFDD DLSLLSTLED LKPGAKVS