Gene Apre_1435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1435 
Symbol 
ID8398245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand+ 
Start bp1555829 
End bp1556521 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content39% 
IMG OID644995800 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003153179 
Protein GI257066923 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAACAC AAAAAGCTAA TAAAATAAAA AGAACCTTCG TCAAAGACGA AGCTTACAAT 
ATACTTCACG ATAAGATTAT TTCTGGAGAG CTTACTCCTT ACACCCAACT TAAGATCTCT 
GAGCTTTCCA AAGAACTTGG GATTTCACGA ACTCCGGTAA GAGAAGCCAT CCTTAGGCTA 
GAAAACGAAG ATCTGGTTAT AAGCAAGGCC AATCAATGGA CTATGGTCGC TCCAATCAAG 
GTAGAAAGGC TAAGAGATAT CTACCCCTTA GTCCTTGAGC TTGAAAGCTA CGCCTTAAGG 
GAGAACTTCG ATCATATCAC AGATGAATTC ATAGATGAGC TTGAGAAGAT CAACAAGCAA 
ATCAAGATGG AGCACATGAA CGAAAATATT ATGAGAGTAA TCGAGCTTGA TGATGACTTC 
CACGACCTAA TAGTAGGACT TTCTCCAAAC AAGGAAATCA AACCTATTAT AGATAGGCTT 
AAGAAGAGGA TCAAAAGATT CGAAATAGGC TTCTATCAGG CCAAGGACTC CCACAAGGCC 
CCATCGACTT ACGACGAGCA CCTAATCTTA ATAGAAAGCC TCAGAAAAAG AGACCTAGAT 
AAGTCCCTAG ATGCCTTAAG GAAAAACTGG ACTACGACTA TTACAGATGA GTCAATAGAA 
AAAATCAGCA AGCTTTTAAA TGTTGAAAAA TAA
 
Protein sequence
MTTQKANKIK RTFVKDEAYN ILHDKIISGE LTPYTQLKIS ELSKELGISR TPVREAILRL 
ENEDLVISKA NQWTMVAPIK VERLRDIYPL VLELESYALR ENFDHITDEF IDELEKINKQ 
IKMEHMNENI MRVIELDDDF HDLIVGLSPN KEIKPIIDRL KKRIKRFEIG FYQAKDSHKA 
PSTYDEHLIL IESLRKRDLD KSLDALRKNW TTTITDESIE KISKLLNVEK