Gene Apre_1411 details

Gene Information

• Locus tag: Apre_1411
• ID: 8398221
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anaerococcus prevotii DSM 20548
• Kingdom: Bacteria
• Replicon accession: NC_013171
• Strand: -
• Start bp: 1518078
• End bp: 1524458
• Gene Length: 6381 bp
• Protein Length: 2126 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 644995776
• Product: sugar-binding domain protein
• Protein accession: YP_003153155
• Protein GI: 257066899
• COG category: [R] General function prediction only
• COG ID: [COG5271] AAA ATPase containing von Willebrand factor type A (vWA) domain
• TIGRFAM ID: [TIGR01168] Gram-positive signal peptide, YSIRK family; [TIGR02331] Rib/alpha/Esp surface antigen repeat

Plasmid Coverage information

• Num covering plasmid clones: 0
• Plasmid unclonability p-value: 0.183423
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATACTA ATGACAAATT AGTGAAGATT ATTGAGTACA AGAAACTCAA AGGATCTATC 
AGAAAACCAA AGTATGCAAC CAGAAAGCTT TCTATAGGCT TAGTTTCATG CATGCTAGGT 
TACGCTTTAC TAGTTTCTCC AACATCTGTT GAAGCTACTG AAGGAAACGC AAATGCAAAA 
ACTGAAGTAG TAGAAAGAGG AGATATAGAA GAAGTAGAAA CTCCTGATGA AGGAGAAGCT 
AAGGTTGAAG TTCCAGTAGC TACCCCGGAA CCAGATGAAG AAGTTATAAC AGAAGCTGAT 
AATTTCAATG CAGAGCTTGA AAAGCTTACT GCAAAGGTAG GAGATAGCTC AATTGACTAC 
AAAAAAGCAA TCAAAAACCT ACCAGAAGAC GCTAAACTTA CAGTAAAAGC TCCAGCAGAC 
ACCAAAGAAG CAGGAGAAAA GACTGTTGAA GCTACAATTA CATTTGCTGA TGGATCTGAA 
AAAGATCTTA AAATCACAGT TGATGTAAAG GCTGAGGAAA AACTTGAAAA AAGCAATGAC 
GGAGCCGACA AAAAAGAAGT TCCAACAGAA GAACAAAGAA AACAAGACCT AGCTAACTAC 
CTAACAAGGA TAGAAAAATC TACAAATCAA GAAGAAATAG ATGCTATTCT TGAAGAAGCA 
GCAGATAAAT ATAAAGATAT TGATTTTGCT CCGTTATTAA ATGCTGGTAT TCAAATAAGT 
GAAAAGACAG AACCACAAGC CTTAAAAGAA TCTAATCCTG ATGAAAAAGA GTTTACAGAA 
GCAAAAGCAA AAGAAAATTG GGATCAAGAA CTAAAAGACA AAGGTTATTG GAAATTAGCT 
GAAGGCCAAA GGTTTAGAAG AGTTTCAGCT AGTGACCCAG TAAGTATATA TGATATTAAT 
TATGATGGAA CTTTTGCTGA TGCAGAAGGT AACACAAATT TAAGATTTAT ATATAATGAA 
TTAAATGGAG TTGGTTCCGG AGTCTGGCAT AGAATTGTAG TTAACTTTGG TGATTTGACA 
GATAAAATTG ATTTTGAAAA ATCTTATGTT GTTGGTGAAG ATGGAAAAAC AACAGAAAAA 
TTCTATGATG TTAATGGTGA AAAGCGTCTA GATATTACCA AATTATATAG TGGACCTAGG 
GCAGGCAAAA GAGTCAATTT CCCTATGAAT ATTGTTCTAA AGGATGGCAA ATCTATTAAT 
GAGATTCCAA AGGAAAATTA TATAGTACAG TTAAGGTTAG TAAACAAAGC AAGACCAAAT 
GTTGCAGAAG GAACAGAAAT TTATACCTAT GCACCTAAGG GAACTTCTGT TGACTACTCA 
TCCTATACAA AGGTAACTTC TGTGGACTTA TCAGATAACA TTAGTTCAAC AGTGTTAGAA 
GGACCAAAGC AAGAAAAAGG CGAAAGGATT GCCATCCAAA GGTCTTACAT GTCAGAATTT 
ATAGCAAATC CAAAAGAATA TGATGACTCT ACTCAAATAG GTATTTTAAG AACAGAATAT 
CTAGGAAAAA GAGGTGGATC TATTGGTGAA AACATTAAAG ATGTAGACGG TAAGCCGATT 
GGATTTGCAC AAGTATTTGA TGCAAAACTA GTTGATTATT TAAAAGAAGA TACTAATGGT 
AATGTAGCCT ATACAAATGT CCTTACTAAC GATAGAAAAC AAGGATCCTG GGTAAAGAAA 
ATAGGAATTA AAAAAGCTGA TATTACAATA AAAGATGGTC TAGCATATGT AGTTATTGCC 
AGAAATGATT CCGTAAATGC ATTCAAAAAT AATGAAATAA AGGCTGTTGG CGTTCCTACT 
CTTGACCAGT ATATCAATCA ATCTGGTATA TATTTTTCAT CTATAGATTA TTTAATTGAT 
AAGACAAAGT TGAACGAAGA GTTTACACCA GGCAAAAGAA AAACAGACTT TTCAATGGCT 
GCTGGTTGGG TAGAACCAAA CACAAAGGGA TGGACAATTT TTGAAAAAAC ATTTGACGAG 
GATTTTGTTG TACCTAAAGG GGAAAAGTAT ACTATCAACA CAACAAACGT TCCTGAAGGC 
GGTCAAGTTA TAATTCAAGT TGGGGATAAA AATCAGGCAA TACTAAGAAA TAAGCAGGGT 
TATTATAACA GTACAGTTTC TTTCTGGAAA CAAGGGGTTG ATTCAGTCGA TGAAACTAGC 
CCTGGAACCT ATGAATTCAC ATTAAGAGAA GGTGCCACAA TAAAGAAGGG TGAAGGAATT 
AGAGTTCTCT TACCTGACAC TCCTGATCAT ACTTCACCAG TAAGTTTTGT AAATCAACAT 
AATGCAGATG GTGGAACCGA ACTCAAAGTA GAATCAAATT CAGGAAATAT TAAGGTTAAA 
CTTAATAATT CTGCCAATGG AGATATCAAA TTAAAGTACA CTCTTAAAGG TGAAACAGAA 
CAAAGTGAAA TTGTATACAA AAAGAAGCTA GTAGGTTGGG AAAAGCCAAA TGATCCTGAT 
AATATCTTAG AAGGCTTAGG AAAAGCTTGG ATAACTAAAT CAAAGTTAGA GCCTGGTACA 
AAAATACTTG TAGAACATTA TGATGCTAGT GGAAAAAAAG TAGATAGTCT GGAATCTTAT 
ATTATTTATA AGGAGCTAGA AAAAAGCCCA GAGAGATATA CTAATATAGC TTGGGTTGAT 
TCTACAGACA CATTATCAGA AGTTTCAATG AGAAAATCAT TATATAAACC ATACCAAGTT 
ATCTTTACAA ATGACTATGC AGAAGGAACT GATGATTTCT ACAAAGACCC TAAGGCTTTA 
CCATCTGATA ACACTGAATT TATGAAAACT ACTGATAAGA TTCAAGGTTA TACAAAATAT 
GACGGCGGAT TAATCAGAAT GCGTACAGAG CTTTTAGATG ATATAGCACT TTTAGGTAAA 
ACTCAAGCCC TAGCTAATGA ATATGATAAA GATGGAAATG TCACAACAGA CAATAGTTCT 
AAGCTTACAT TAAAAGGAGC TAATGGAGAA AAAGAATATA GGGTTTATAG ATATGATATC 
GATCTTAATA AACTAGGAGA AATTTCAAAA GCTGGAACAT CAGCTAGAGA TGTTGATGCA 
GAAGGAAATA ACAAGCTAGT TCTTAAAAAA GATATGAAGC TCTATTTCAA TGCATCAGAC 
GGATCTTCCC TACCAACTGA GTTAGTTGAA TCAAGAGTAA GAACAAGAGT ATTATTCGAT 
ACAACAGATG GAAAGTTTGC TGATGCTAGC ACAAGATCAG TAAGAATTGC TCCAGATAAC 
GTGAAATATC TTGAGGATGC AGGATATACA GCAAACGGAT TTACAGGTGC AAATGTAGCA 
GAAGGTACAG GAGATAAATT TGCTGAAAAT CCAACAGCAG AAGGCAAGAC ATTCCTAGGT 
TGGGTAACTG AAGCAGGTAA AGCTGAACTA GGAGCAACAA CTGTTAAATC AGATGCCTTC 
AATAAATTAT CAGCAGATAA AAAATTCACA TCAGAAACTC CAATAACTAC TCACCAAGTT 
GTATATGCAA TTTACTCAGA TGAAAAATTA GTAACATTTG ATGCTAATGG CGGTAAGTTT 
GACGATAATT CAACTACAAA GACAGATGAT ATAACTGACG GAGTTCAAGC ACCAACACCA 
ACTCAAGAAG GAAAAGAATT CGTAGGTTGG GCAAGCAAAC CTGATGCAAT AGAAGCTGAA 
GCAGGAATCT TAGATAAAGT AACAGAAGGA CAAACTGTTT ATGCTGTTTG GAAAGACGCT 
AAGACTCAAA CAGATGCACA AAAGAATCCA GCAGTTGATC CAACTAAGAC AGAAGTTGCA 
AACAAAGATA AGTTAACTGA AGACGAAAAA GCTAAAGTAG TTGAAGAAGT TAAGAAAGCA 
AACCCAGAAG CTAAAGACGT AACAGTTGAT GATAAGGGTA ATGCAACATT AACTTACGAA 
GATGGAACAA CAAATGAAAT TCCTGGAGAA AAGACAGTAA CTGAAAAAGC AAAAACAGAT 
GCTGAAAAGA ACCCAGCAGT TGATCCAACT AAGACAGAAG TTGCAAACAA AGATAAGTTA 
ACTGAAGACG AAAAAGCTAA AGTAGTTGAA GAAGTTAAGA AAGCAAACCC AGAAGCTAAA 
GACGTAACAG TTGATGATAA GGGTAATGCA ACATTAACTT ACGAAGATGG AACAACAAAT 
GAAATTCCTG GAGAAAAGAC AGTAACTGAA AAAGCAAAAA CAGATGCTGA AAAGAACCCA 
GCAGTTGATC CAACTAAGAC AGAAGTTGCA AACAAAGATA AGTTAACTGA AGACGAAAAA 
GCTAAAGTAG TTGAAGAAGT TAAGAAAGCA AACCCAGAAG CTAAAGACGT AACAGTTGAT 
GATAAGGGTA ATGCAACATT AACTTACGAA GACGGAACAA CAAATGAAAT TCCTGGAGAA 
AAGACAGTAA CTGAAAAAGC AAAAACAGAT GCTGAAAAGA ACCCAGCAGT TGATCCAACT 
AAGACAGAAG TTGCAAACAA AGATAAGTTA ACTGAAGACG AAAAAGCTAA AGTAGTTGAA 
GAAGTTAAGA AAGCAAACCC AGAAGCTAAA GACGTAACAG TTGATGATAA GGGTAATGCA 
ACATTAACTT ACGAAGACGG AACAACAAAT GAAATTCCAG CAGACAAGAC AGTAACTGAA 
AAAGCAAAAA CAGATGTTGA TAAGAGACCA CTTCAAAATG AAGTAGATAA AAAAGATGAT 
ACAAAAGCAT CAGACAAGTA TAAGAATGCA GACCAAGATA AAAAGGATGC ATACGACAAA 
GCACTAGAAG ATGCTAAGAA AGTACTTGAA GATCCAAATG CAAGCCAAGA AGATGTCAAC 
AAAGCTAAAG ACGCTTTAAC ATCAGCAGAA GAAGCTTTAA ACGGCAAAAA AACTCCAGAA 
GTAGATAAAT CAGCACTTCA AAAAGAAGTA GCCAAAGAAA ATACTACTAA GGATACAGAC 
AAGTACAAAA ATGCAGACCA AAATAAAAAG GATGCATACG ACAAAGCACT AGAAGATGCT 
AAGAAAGTCC TTGAAAATCC AAATGCAAGC CAAGAAGATG TCAACAAAGC TAAAGACGCT 
TTAACAGCAG CAGAAGAAGC ATTAAATGGA GAAAAAACTC CAGAAGTAGA TAAATCAGCA 
CTTCAAAAAG AAGTAGACAA AGAAAATACT ACTAAGGATA CAGACAAGTA CAAGAATGCA 
GACCAAGACA AAAAGGATGC ATACAACAAA GCACTAGCAG ATGCCGAAAA AGTACTAAAA 
GATCCAAATG CAAGTCAAGA CGATGTCAAC AAAGCTAAGC AAGCACTAGA AGATGCAGAA 
AAAGCACTAA ACGGTGAATC AACATCAGTA GATAAAAAAG CACTAGAAGC TGAAGCAGCT 
AAAAAAGACA CAACAAAAGC ATCAGATAAG TACACAAATG CAGACCAAGA CAAAAAGGAT 
GCATACAACA AAGCATTAGC AGATGCCGAA AAAGTACTAC AAGATCCAAA TGCAAGTCAA 
GACGATGTCA ATAAAGCTAA GAAAGCGCTA GAAGATGCAG AAAAAGCACT AAATGGTGAA 
TCAACATCAG TAGATAAAAA AGCACTAGAA GCTGAAGCAG CTAAAAAAGA CACAACAAAA 
GCATCAGATA AGTATACAAA TGCAGACCAA GACAAAAAGG ATGCATACAA CAAAGCATTA 
GCAGATGCCG AAAAAGTACT ACAAGATCCA AATGCAAGTC AAGACGATGT TAACAAAGCT 
AAGAAAGCGC TAGAAGAAGC GGAAAAAGCA CTAAATGGTA AAGCTAGTGA CGTTTCTGAT 
AATATTAGTC CAAATCTTCC AGGAAAAACA GAAGTAGAAG ATAAAGACAA CTTAACTGAA 
GAGGAAAAGG GTAAGGTTAA GGAAGAAGTT AAGAAGGCAA ACCCTAAGGC TAAAGACGTT 
GACGTTGATA ACAAGGGTAA TGCAACTCTA ATTTACCCAG ATGGATCAAA GAATTATATC 
TCTTCTGACA AGACAGTAAG CGAAAAAGAA AAATCTATAA AAGATAAAAC AGATGCTGAA 
GGTAACTTAG CAGTTGCACC AAGCAAAAAG CTTGGAGTAG CCGATAAGGG TAACTTAACA 
GATGCTGAAA GAAGAGAAAT AGCTGATAAT GTGAAGAAAG CTAATCCAAA TGCAAAAGAA 
GTAATCGTTG ATGCACAAGG AAAGGCAACA TTAGTATATC CAGATGGATC AAGAAACTTC 
ATCCCAGCAA GCGAATTAAT CTACGAAAAA GCTAAGGGAC TTGTAGCAGA TAAAACTGTT 
CAAACAACAA ACAAGACAGG CAAGGCTGCT AATACAAATG TTAAGACAGG AGTAGAGTCA 
TTAACAGGAG TAATGGCAAC ACTAGCTACA GCAGTAGGTG GATTGTTCGT AAGCAAAAAA 
AGAAAAGACG ATGATAGATA A 

 

Protein sequence

MDTNDKLVKI IEYKKLKGSI RKPKYATRKL SIGLVSCMLG YALLVSPTSV EATEGNANAK 
TEVVERGDIE EVETPDEGEA KVEVPVATPE PDEEVITEAD NFNAELEKLT AKVGDSSIDY 
KKAIKNLPED AKLTVKAPAD TKEAGEKTVE ATITFADGSE KDLKITVDVK AEEKLEKSND 
GADKKEVPTE EQRKQDLANY LTRIEKSTNQ EEIDAILEEA ADKYKDIDFA PLLNAGIQIS 
EKTEPQALKE SNPDEKEFTE AKAKENWDQE LKDKGYWKLA EGQRFRRVSA SDPVSIYDIN 
YDGTFADAEG NTNLRFIYNE LNGVGSGVWH RIVVNFGDLT DKIDFEKSYV VGEDGKTTEK 
FYDVNGEKRL DITKLYSGPR AGKRVNFPMN IVLKDGKSIN EIPKENYIVQ LRLVNKARPN 
VAEGTEIYTY APKGTSVDYS SYTKVTSVDL SDNISSTVLE GPKQEKGERI AIQRSYMSEF 
IANPKEYDDS TQIGILRTEY LGKRGGSIGE NIKDVDGKPI GFAQVFDAKL VDYLKEDTNG 
NVAYTNVLTN DRKQGSWVKK IGIKKADITI KDGLAYVVIA RNDSVNAFKN NEIKAVGVPT 
LDQYINQSGI YFSSIDYLID KTKLNEEFTP GKRKTDFSMA AGWVEPNTKG WTIFEKTFDE 
DFVVPKGEKY TINTTNVPEG GQVIIQVGDK NQAILRNKQG YYNSTVSFWK QGVDSVDETS 
PGTYEFTLRE GATIKKGEGI RVLLPDTPDH TSPVSFVNQH NADGGTELKV ESNSGNIKVK 
LNNSANGDIK LKYTLKGETE QSEIVYKKKL VGWEKPNDPD NILEGLGKAW ITKSKLEPGT 
KILVEHYDAS GKKVDSLESY IIYKELEKSP ERYTNIAWVD STDTLSEVSM RKSLYKPYQV 
IFTNDYAEGT DDFYKDPKAL PSDNTEFMKT TDKIQGYTKY DGGLIRMRTE LLDDIALLGK 
TQALANEYDK DGNVTTDNSS KLTLKGANGE KEYRVYRYDI DLNKLGEISK AGTSARDVDA 
EGNNKLVLKK DMKLYFNASD GSSLPTELVE SRVRTRVLFD TTDGKFADAS TRSVRIAPDN 
VKYLEDAGYT ANGFTGANVA EGTGDKFAEN PTAEGKTFLG WVTEAGKAEL GATTVKSDAF 
NKLSADKKFT SETPITTHQV VYAIYSDEKL VTFDANGGKF DDNSTTKTDD ITDGVQAPTP 
TQEGKEFVGW ASKPDAIEAE AGILDKVTEG QTVYAVWKDA KTQTDAQKNP AVDPTKTEVA 
NKDKLTEDEK AKVVEEVKKA NPEAKDVTVD DKGNATLTYE DGTTNEIPGE KTVTEKAKTD 
AEKNPAVDPT KTEVANKDKL TEDEKAKVVE EVKKANPEAK DVTVDDKGNA TLTYEDGTTN 
EIPGEKTVTE KAKTDAEKNP AVDPTKTEVA NKDKLTEDEK AKVVEEVKKA NPEAKDVTVD 
DKGNATLTYE DGTTNEIPGE KTVTEKAKTD AEKNPAVDPT KTEVANKDKL TEDEKAKVVE 
EVKKANPEAK DVTVDDKGNA TLTYEDGTTN EIPADKTVTE KAKTDVDKRP LQNEVDKKDD 
TKASDKYKNA DQDKKDAYDK ALEDAKKVLE DPNASQEDVN KAKDALTSAE EALNGKKTPE 
VDKSALQKEV AKENTTKDTD KYKNADQNKK DAYDKALEDA KKVLENPNAS QEDVNKAKDA 
LTAAEEALNG EKTPEVDKSA LQKEVDKENT TKDTDKYKNA DQDKKDAYNK ALADAEKVLK 
DPNASQDDVN KAKQALEDAE KALNGESTSV DKKALEAEAA KKDTTKASDK YTNADQDKKD 
AYNKALADAE KVLQDPNASQ DDVNKAKKAL EDAEKALNGE STSVDKKALE AEAAKKDTTK 
ASDKYTNADQ DKKDAYNKAL ADAEKVLQDP NASQDDVNKA KKALEEAEKA LNGKASDVSD 
NISPNLPGKT EVEDKDNLTE EEKGKVKEEV KKANPKAKDV DVDNKGNATL IYPDGSKNYI 
SSDKTVSEKE KSIKDKTDAE GNLAVAPSKK LGVADKGNLT DAERREIADN VKKANPNAKE 
VIVDAQGKAT LVYPDGSRNF IPASELIYEK AKGLVADKTV QTTNKTGKAA NTNVKTGVES 
LTGVMATLAT AVGGLFVSKK RKDDDR