Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_1344 |
Symbol | |
ID | 8398151 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | - |
Start bp | 1446399 |
End bp | 1446953 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 644995706 |
Product | translation initiation factor IF-3 |
Protein accession | YP_003153088 |
Protein GI | 257066832 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0290] Translation initiation factor 3 (IF-3) |
TIGRFAM ID | [TIGR00168] translation initiation factor IF-3 |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000182733 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTGCCCGC TTTTTTTAAT ATATGGAGGT ATACTTATAA AAGATTTAAG AATAAATGAT GAAATTAGAG CTAAGCAAGT AAGACTTATT GATGAAAATG GTAATCAGGT AGGAATAGTT GACCTAAACA GAGCCCTAGA CATGGCTTAT GATAGCAAAC TTGACCTAGT GTTGATGAGC CCAAAGGCTA AGCCACCCGT TACTAGAATA ATGGATTACG GCAAGTTCAA ATATGATCAA GAGAAAAAAG AAAAAGAGAA TAGAAAAAAA CAAAAAAATG CTCAACTAAA AGAAACAAGA TTTTCTCTTA ATATAGAAGA TAATGACTTG CAAACAAAAG CAAATCAAAG CATGAAATTC TTAAATAACG GGGATAAAGT AAAAGTTTCT ATAAGATTCC GTGGTAGAGA GCTTGGACGT AAAGAGCCTG GCTATGAATT GATGGATAAG TTTAAGACAA TGCTAGGAGA TTCCTACAAG GTTAGCAAAA AACCAAAAAT GGAAGGAAGA TCTCTAGTAA TGTTTCTAGA ACCAAACGAC GAAAAAGGAG AATAA
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Protein sequence | MCPLFLIYGG ILIKDLRIND EIRAKQVRLI DENGNQVGIV DLNRALDMAY DSKLDLVLMS PKAKPPVTRI MDYGKFKYDQ EKKEKENRKK QKNAQLKETR FSLNIEDNDL QTKANQSMKF LNNGDKVKVS IRFRGRELGR KEPGYELMDK FKTMLGDSYK VSKKPKMEGR SLVMFLEPND EKGE
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