Gene Apre_1288 details

Gene Information

• Locus tag: Apre_1288
• ID: 8398078
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Anaerococcus prevotii DSM 20548
• Kingdom: Bacteria
• Replicon accession: NC_013171
• Strand: +
• Start bp: 1385356
• End bp: 1385766
• Gene Length: 411 bp
• Protein Length: 136 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 644995633
• Product: large conductance mechanosensitive channel protein
• Protein accession: YP_003153032
• Protein GI: 257066776
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1970] Large-conductance mechanosensitive channel
• TIGRFAM ID: [TIGR00220] large conductance mechanosensitive channel protein

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTAAAAG AATTTAAAGA ATTTATAGCA CGTGGCAATG TAATTGATAT GGCTATTGGT 
ATAATCATGG GATCTGCCTT CACAGCGATT GTAAAAAGCT TGGTAGATGA TATCCTAATG 
CCAATCATAT CAGGACTTAC TGCTGGAATA AACTACGAAG ATATAGTAGT TAATATTGCA 
GGAGCAAGCC TAAAGGTAGG TAACTTCATC AACGCTGTCA TATCATTTCT AATTATCGCC 
TTTGTAATGT TTATGATAGT TAAGGCACTA AACGCAAGAC ACAAAGATGA TGAAGAGGAA 
GAAGTAACAA CAAAAGATTG TCCATACTGC AAAAGCGAAA TACCAGTAGA AGCAACAAGA 
TGCCCTCACT GTACATCTAA ACTTGCTGAA TACAAAAACG CAAACGAATA A 

 

Protein sequence

MLKEFKEFIA RGNVIDMAIG IIMGSAFTAI VKSLVDDILM PIISGLTAGI NYEDIVVNIA 
GASLKVGNFI NAVISFLIIA FVMFMIVKAL NARHKDDEEE EVTTKDCPYC KSEIPVEATR 
CPHCTSKLAE YKNANE