| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_1272 |
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| Symbol | |
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| ID | 8398061 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaerococcus prevotii DSM 20548 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013171 |
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| Strand | - |
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| Start bp | 1364464 |
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| End bp | 1366434 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644995616 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_003153016 |
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| Protein GI | 257066760 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAATT CGAAAATAAT TGACAAGAAA AAACTAATAC TAGGATTTTT TGATATATTA
ATTATCAATT TAGCTTATTT TCTAGCCCTG TATTTCAGAT TTGATATGAA TTTCAGGGCC
ATACCTTTGG ATTTCCTTGA TGCTTTCAAG ACCTATGCTA TTTTTAATAC CATCCTTACG
ATAGCTATTT ACGGTCTACA CAAGATGTAT AACATGATAC TGGAGTATGC TTCCTACAAG
GAGCTTATTA ATATCACTCA AGCTGTTATT CTATCTCTTA TAAGTCACGC TGTATTAATG
ACAATTTTTG TCTATAGAAT GCCAATATCA TACTATATAT TCGGATTTAT GATTCAATAT
GTTTTGACTG TGGCATCAAG ATTTATCAAG AAGATGATGA TTCACAAAAG CTACAAGACT
GACAAGAAGA ACCAGTCTTA CAAGAGAGCC CTAATCGTTG GGGCAGGATC TGCAGGACAG
ACTCTAAAAA GAGATATATC TAATTCCAAC AATGGTGGCA AGACTAATAT TCTTGTTGTT
GGCTTCATAG ATGATGATCC AAAGAAGAAA AATCAATACA TAGATAATAG TAGAATCTTC
GGTGGAAGGG ATATGATAAA GGAAATTGTC GAGGAAGAAG CCATCGATGT TATTCTTGTA
GCTATTCCTT CTGTAGAGGA AGTCGAGAAG AGAGAAATCC TAAGAATATG TAACGAAACA
GGATGCGAGG TCAAAGTTCT TCCTGGTATT TACCAACTTG TTTCAGGAAA AGTTACCATG
TCTACTATGA AGGATATCCA AATCGAAGAC CTTTTAGGAC GTGATCCGGT AAAGATTTTC
TCCAACGAAA CTTTCGATTA CCTCAATGAC AAGGTAGTCC TAGTTACAGG AGGGGGAGGA
TCCATAGGAT CTGAACTTTG TAGGCAAATA GCTCAATATG GTCCAAGACT ACTTATAATA
TTCGATATAT ACGAGAACAA TGCCTATGAA ATAGAGCAAG AACTTAAGAG AAACAACAAG
GACCTCAACT TTATAACCCT AATAGGCTCT GTAAGAGACT ACAAGAGAGT GGAGAAGGTA
TTTAAGACCT ATAAACCAGA CATAGTATTT CACGCAGCAG CCCACAAGCA CGTACCGTTG
ATGGAAGTAA GTCCAGTGGA AGCTATCAAG AACAATGTCA GAGGAACATA CAATGTCGCC
CTACTTTCCC TAATCTATGA CGTTCAAAGA TTTGTTCTCA TATCAACAGA CAAGGCAGTC
AACCCAACAT CAGTTATGGG AGCAACCAAG AGAGTTTGTG AGAAGATAAT CCAAGGAATA
AATGACATAA GAGATAGCAA AGAATATAAT AATCTTGCAA AGGTAATTGT CCAAGATGGG
GACAGAAATA TTACAATTAA TCCTGAAGAC TTGCTAGAAG GGAAAAATCC AGGAACCGAA
TTTGTTGCAG TTCGTTTTGG TAATGTATTG GGATCGAATG GTTCTGTAAT ACCACTATTT
AAAAAGCAAA TCGCAGCGGG TGGACCTGTT ACAGTTACCC ACCCAGAGAT AATCAGATAC
TTTATGACAA TTAAGGAAGC TGTAAAGTTA GTCCTTCAAG CTGGATCCAT GGCCCAAGGC
GGTGAAATAT TCGTCCTAGA TATGGGAGAA CCAGTCAAGA TTGACGACCT GGCAAGACAG
CTAATAAGAC TATCAGGTTA TCAACCAGAC ATAGATATGC CTGTAGTCTA TACGGGACTT
AGACCTGGAG AGAAGCTCTA CGAGGAAAGA CTGATGGACG AGGAAGCCCT CACAGATACC
CACATTGAGG GAATATCTGT AGGCCGACCA CTAGACTTCT CTAGGGGAGA ATTTTTCGGG
AAACTTGATA AAGTAATCAA TCAAGAAAAT ATTGATGAAC TTGATATCAT AGCAACGATT
AATGAGTTAA TTACTACATT TATAGGAAAG GATAATTCGA AGGGAGAATA G
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| Protein sequence | MKNSKIIDKK KLILGFFDIL IINLAYFLAL YFRFDMNFRA IPLDFLDAFK TYAIFNTILT
IAIYGLHKMY NMILEYASYK ELINITQAVI LSLISHAVLM TIFVYRMPIS YYIFGFMIQY
VLTVASRFIK KMMIHKSYKT DKKNQSYKRA LIVGAGSAGQ TLKRDISNSN NGGKTNILVV
GFIDDDPKKK NQYIDNSRIF GGRDMIKEIV EEEAIDVILV AIPSVEEVEK REILRICNET
GCEVKVLPGI YQLVSGKVTM STMKDIQIED LLGRDPVKIF SNETFDYLND KVVLVTGGGG
SIGSELCRQI AQYGPRLLII FDIYENNAYE IEQELKRNNK DLNFITLIGS VRDYKRVEKV
FKTYKPDIVF HAAAHKHVPL MEVSPVEAIK NNVRGTYNVA LLSLIYDVQR FVLISTDKAV
NPTSVMGATK RVCEKIIQGI NDIRDSKEYN NLAKVIVQDG DRNITINPED LLEGKNPGTE
FVAVRFGNVL GSNGSVIPLF KKQIAAGGPV TVTHPEIIRY FMTIKEAVKL VLQAGSMAQG
GEIFVLDMGE PVKIDDLARQ LIRLSGYQPD IDMPVVYTGL RPGEKLYEER LMDEEALTDT
HIEGISVGRP LDFSRGEFFG KLDKVINQEN IDELDIIATI NELITTFIGK DNSKGE
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