| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_1139 |
|---|
| Symbol | |
|---|
| ID | 8397927 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | - |
|---|
| Start bp | 1224443 |
|---|
| End bp | 1225759 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 644995485 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003152886 |
|---|
| Protein GI | 257066630 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1306] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000000332623 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAATA AAAAGTTAAT CATTTCTTTT TTGATGACTC TTGTACTTAT TTTCACTGCT
TGCTCAAAAG AGACTAGCAA AAGCACAGAG CCTAGTGAAA ATAAAAAGAG CGAAGAGAGT
ATCGAAAATA GAGATGATTC TAAGGAAAAA GATGATAAGG CTAACAACAA GGGCTTGGTT
AATGAAGCTG TCGATAAGGA AATTGGTGTA CCTTACGAGG TAGGTGTTAC TCCTGATGAC
TACAATATGG ACTATGATAC TTCAAGACTT CACTCTCTTA AGGATAAGAA GAGCAAATAC
TATCCTAAAG ATGGGGTTAA GGGTTTGTAT TTCAATACAT ATTCCATAAA CAATCCCGAA
GTTTACGATA AAATAATGGA TATGTTGGAA AATACTAGAC TTAACTCAAT AGTAGTCGAT
ATCAAAGATG ACTGGGGCAA TGTCACAATG GATTTCGATA CTGATGATCC TGATATTGAA
TATGCAAGTA TTGATATTAT AAATCCAAAA GAATTTATCA AAGAGATGCA CGATAAGGGA
ATTTATGTTA TTGGTAGGGT AACTACCTTC AAGGATTCTA TAATTACAGA AAAGCATCCT
GATCGGGGCT TTACCCTTGA TGATGGTTCC TTGTGGAAGA ATGGTCATGG CGAGGCTTTT
ATGAATCCTT TCCTTAAAGA AGTCCAAGAC TATGATATAA AGATTGCAAA ACTTGCCGCC
GAAGCTGGCT TTGATGAGAT TCAGTTTGAC TATGTAAGAT TTGCTGAAGG CTTTGAGAAC
TTTGGTGATA CTCTAGACTA TCCTAGGGGA GAATTTGAAG ATAAGAATAT GGAAGAAGGC
GATAAGAGAG TCGCAGCAAT TACAGGTTTT GTTCAAAGAG CTAGAGAAGA ACTCCAAGAT
AAAAAAGTTC CTATTTCTAT AGATGTATTT GGCTACGCTC TTCAGGTTGA AAGAGCAGGT
GGTATCGGTC AAGATTTTGG TGAGATGAGC AACCAAACCG ATGTTATATC TTCTATGATT
TATCCTTCTC ACTGGGGATT TAACTCTTTT GATATAGAAA AGCCTGACCT TGAACCATAT
GAACTTGTCA AAAGATACTT GAAAGCGGAG CAAGAGTATC TATCAAAACT TGACCATCCA
CCTCTATCAA GACCTTGGAT CCAAGACTTT ACTGCAAGCT GGATAGGTGA TGGCAACTGG
ATGGAATATG ATAAGGATGC GGTTGAAGCT CAAATCAAGG CCATATACGA TTCTGGTCAA
GAGGAGTTTC TGATTTGGAA TGCAAGCAGT GAATATACTC AAGGTGTGGA ATACTAA
|
|---|
| Protein sequence | MKNKKLIISF LMTLVLIFTA CSKETSKSTE PSENKKSEES IENRDDSKEK DDKANNKGLV
NEAVDKEIGV PYEVGVTPDD YNMDYDTSRL HSLKDKKSKY YPKDGVKGLY FNTYSINNPE
VYDKIMDMLE NTRLNSIVVD IKDDWGNVTM DFDTDDPDIE YASIDIINPK EFIKEMHDKG
IYVIGRVTTF KDSIITEKHP DRGFTLDDGS LWKNGHGEAF MNPFLKEVQD YDIKIAKLAA
EAGFDEIQFD YVRFAEGFEN FGDTLDYPRG EFEDKNMEEG DKRVAAITGF VQRAREELQD
KKVPISIDVF GYALQVERAG GIGQDFGEMS NQTDVISSMI YPSHWGFNSF DIEKPDLEPY
ELVKRYLKAE QEYLSKLDHP PLSRPWIQDF TASWIGDGNW MEYDKDAVEA QIKAIYDSGQ
EEFLIWNASS EYTQGVEY
|
|---|
| |