| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_1059 |
|---|
| Symbol | |
|---|
| ID | 8397846 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | - |
|---|
| Start bp | 1131232 |
|---|
| End bp | 1132407 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 644995406 |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_003152807 |
|---|
| Protein GI | 257066551 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
|---|
| TIGRFAM ID | [TIGR01891] amidohydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0752616 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTTT TTGAAAAATC AAACGAAATT AAAGAGTACA TGATTGATAT AAGAAGAAGA
ATTCACGAAA ATCCAGAACT CGCTTTTGAC TTGGAAGATA CAAGTAAGCT TGTCAAAGAA
GAATTAGATA AATTAGGGAT TAGCTATACT TCCCCAATAG AAAACTCAGT ACTTGCAAGT
TTGGGCAAGG GAGATAGGAC GATATTATTA AGAGCCGATA TGGACGCTCT TCCAATAGAA
GAAGAAAATG ATTTGGATTT TAAGTCAAAG AATCAATGCG GACATATGTG CGGCCATGAT
TTTCATACAG CAATGCTTTT AGGAACTGCC AAGATCTTAA AGGGAATAGA AGAAGACCTT
GATGGTGTTG TCAAATTAAT GTTTCAACCC GCTGAGGAAA TCCTAAAGGG TTCAGAAAAA
ATGATAGAAG CGGGAATCCT AGACAATCCC AAGGTAGATA GGGCAGTTAT GGTTCATATG
GATACTACAA GACCTATGGG CATTTATATA AAAGATGGAG CCATGGCTAC ATCAAATAAT
AATTTTAGAA TTAGAGTCGA AGGGAAATCT TGTCATGGTG CAATGCCAGA AAATGGAATC
GATGCAGCCT TTGTTGCAAG CCAAATCGTA AATGGCCTAC AAGAAATTGT ATCTAGAGAG
CTTTCCTTTA CCAAGGGAGC GGTACTTACT ACAGGTCATA TCAAGGCAGG ATCTGCTCCT
AATATAATAC CAGACAAGGC TATTATCGAA GGAACTTGTA GGACCTATCA TGAAGAAAGT
AAAAAGCATA TTCAAAAAAG AATTCCAGAA CTTAGTAAAT ATATAGCCAA GGCCTATAGG
GCAGATTCGA CATTTGAGAT TCTTTCGGAT GTTCCTGCTA TAATTAATGA TAAGGACTTT
TATAAAGACG CTATTAGAGT CTTAGAGAAT GTTAAAGAAG AAAATAAGGA CTTTAACTTA
ATAGATGATT GTGAAGCGGT TACGGCAAGC GATGACTTCG CAAATGTAGC AAGGCTTGTT
CCGTCCTTAA TGCTAATGGT TGGTTGTAAA GTAGAAAATG GCGAGGTCTA TCCTCTTCAT
AACGGTAAGG CGATCTTTAA TGAAGATTCA ATTGTCTATG GTCCTACTAC TATGGCAAGC
CTTGCCTATG ATTATTTGAA AGGAGAAAAT AAATGA
|
|---|
| Protein sequence | MNFFEKSNEI KEYMIDIRRR IHENPELAFD LEDTSKLVKE ELDKLGISYT SPIENSVLAS
LGKGDRTILL RADMDALPIE EENDLDFKSK NQCGHMCGHD FHTAMLLGTA KILKGIEEDL
DGVVKLMFQP AEEILKGSEK MIEAGILDNP KVDRAVMVHM DTTRPMGIYI KDGAMATSNN
NFRIRVEGKS CHGAMPENGI DAAFVASQIV NGLQEIVSRE LSFTKGAVLT TGHIKAGSAP
NIIPDKAIIE GTCRTYHEES KKHIQKRIPE LSKYIAKAYR ADSTFEILSD VPAIINDKDF
YKDAIRVLEN VKEENKDFNL IDDCEAVTAS DDFANVARLV PSLMLMVGCK VENGEVYPLH
NGKAIFNEDS IVYGPTTMAS LAYDYLKGEN K
|
|---|
| |