| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_1044 |
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| Symbol | |
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| ID | 8397831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaerococcus prevotii DSM 20548 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013171 |
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| Strand | - |
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| Start bp | 1116211 |
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| End bp | 1118061 |
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| Gene Length | 1851 bp |
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| Protein Length | 616 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 644995392 |
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| Product | excinuclease ABC, C subunit |
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| Protein accession | YP_003152793 |
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| Protein GI | 257066537 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
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| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00420676 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACAAAAA AACAGATTAA AGAGAAATTA AAAGAACTTC CAGACCTACC TGGCGTTTAT
ATAATGAGGA ATGCCGAAGA TGAAATTATT TATGTAGGCA AGGCCATTTC CCTAAAAAGA
AGAGTACGCC AATACTTTGA CAATAATAAA AACAAGGGGG CTAAGGTCCT TGCCATGGTC
AAAAACATCG ACCATTTCGA ATATATTATT GTTCAAAATG AGGTAGAAGC CTTAGTTCTT
GAGAGCAATT TAATCAAAAA AAATAGACCC AGATATAATA TAGTCCTAAG GGATGATAAG
CAATATCCCT ATATTAAAAT CTGTAAGGAA AAATATCCTA GGATAAAAAA GGTTAGACAA
GTTTTAAAGG ATGGGGGACG CTACTTTGGA CCCTTTCCTG ATGCTTATGC AGTAAATGAT
GCGATCGATT TATTTCACCT CTATTATCCC TTTAGAACTT GCAATCTAAA CTTCGATAAG
GGTGCAAGGC TAGATAGGCC GTGTCTCAAT TATTTCATCC ATAAATGCAA GGGACCTTGT
GTAGACAAGG AGGATGAGAA AAGATATTTA AACCATATAG ACGACGTGGT GAAGTTTTTA
GAGAACAAAT CAGAAAAAAT CCCGAATTGG GTTCTTGCTA AAATGAATGA TGCGAGTAAG
GATTTGAATT TCGAGATGGC TGCAAAATAT AGAGACTACT ATAGGGCCTT ATCTGTGATT
TCTGAAAGAC AGAACGTTAC AGAAACTGGT GGAGATGACC TAGATATAAT AGCCATGAGT
AAGGGAATGA ATTCTATTAT TATCCAGGTT TTCTTTATGC GTATGGGAAA GATTGTCGAT
AGAGAGCACT TCATAATCAA AAACGATTTT ATGGAAACTG ACTCAGATAT TATGTCTTCA
TTCATAAAGC AGTTTTATCT AGATATAATG TATGTACCAA AAGAAATTCT TGTCCAATAT
ATGCCAGCAG ATTTTGATTC TATTAGCGAA TTTTTATCTA GAAAGAAAAA ATCCAAGGTT
TATATACACA ATCCAAAACT CGGAAAGAAA AAAGAGCTTG TAGATATGGC AAGCCGTAAT
GCTCTCGATA TGAGAATTAA ATATGATAAA AGAGTTGAAA GAAAGGAAAG GAAGAAATCT
TCTGGAATCA ACCAGCTCAT GGACATACTT AATCTTAAAG ATGTATTTAG AGTAGAATGT
TATGATATTT CTAACACATC CGGCGTTCTT TCGGTAGGAT CTATGGTTGT CTTTGAGGGA
GGAATACCAA CTCCTAAGGA ATATAGGAAG TTTAAAATAA AGACTGTAGT AGGAAGCGAT
GATTATGCAT CCCATAGGGA AGTTCTTACG AGAAGGCTAA AACGTGGACT AGAAGAAAAA
GAAAAAGGAA ATACCCAGAC AGGGTTTGGA TCTCTACCTG ATTTGATCTT AATGGATGGA
GGAAAAGGGC AGGTCACTAT AGCAAAAGAA GTTATAGATG GCTTGGGTCT ATCCATAGAA
GTAGCAGGAC TTGTTAAGGA TGATAAACAT ACTACAAGAG CAATAGTCTA TAACAATGAG
GAAATCGCCA TTAACAGGAG AGATCCTGTC TATAAGCTCA TATATGAAAT CCAAGAAGAA
GCTCATAGAT TTGCAATAAA CTACCATAGA AAGCTTATGC AAAACACAAT GAAGACTACA
GAACTAGACA ATATAAAAGG GGTTGGCGAG AAAACTAGGA AAAACCTCTA CAAGCATTTT
AAGACAATTT CAAATATTAA AAAGGCAAGC GTTGAAGAGC TCATGGAAGT TCCTCTGGTG
GGGAAAGTTC AAGCCTTAGA AATATACAAA TATTTTAGAC TGAAAGGATA G
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| Protein sequence | MTKKQIKEKL KELPDLPGVY IMRNAEDEII YVGKAISLKR RVRQYFDNNK NKGAKVLAMV
KNIDHFEYII VQNEVEALVL ESNLIKKNRP RYNIVLRDDK QYPYIKICKE KYPRIKKVRQ
VLKDGGRYFG PFPDAYAVND AIDLFHLYYP FRTCNLNFDK GARLDRPCLN YFIHKCKGPC
VDKEDEKRYL NHIDDVVKFL ENKSEKIPNW VLAKMNDASK DLNFEMAAKY RDYYRALSVI
SERQNVTETG GDDLDIIAMS KGMNSIIIQV FFMRMGKIVD REHFIIKNDF METDSDIMSS
FIKQFYLDIM YVPKEILVQY MPADFDSISE FLSRKKKSKV YIHNPKLGKK KELVDMASRN
ALDMRIKYDK RVERKERKKS SGINQLMDIL NLKDVFRVEC YDISNTSGVL SVGSMVVFEG
GIPTPKEYRK FKIKTVVGSD DYASHREVLT RRLKRGLEEK EKGNTQTGFG SLPDLILMDG
GKGQVTIAKE VIDGLGLSIE VAGLVKDDKH TTRAIVYNNE EIAINRRDPV YKLIYEIQEE
AHRFAINYHR KLMQNTMKTT ELDNIKGVGE KTRKNLYKHF KTISNIKKAS VEELMEVPLV
GKVQALEIYK YFRLKG
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