Gene Apre_1024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_1024 
Symbol 
ID8397811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp1097146 
End bp1097676 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content33% 
IMG OID644995372 
Productchromosome segregation and condensation protein, ScpB 
Protein accessionYP_003152773 
Protein GI257066517 
COG category[K] Transcription 
COG ID[COG1386] Predicted transcriptional regulator containing the HTH domain 
TIGRFAM ID[TIGR00281] segregation and condensation protein B 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAGG AATATCTTAA AGGACTAATT GAAGAAATTT TATATATTTG GGCAGAGCCT 
ATTGATTTGG AAGATCTTTC TGCTATAATT TTCGACTTTG CTAAGAAGGA TATTAAGGTT
GCCCTTGAAG AGTTGATAGA GGAAAGAAAT TCAAAAAAGT CCGGCCTTAT AATTAGACAA
TTCGATAAGT CTTTTCAATT CACCTCGAGA AGTTGCCATG ACAAGTATTT TGAAAAGGTA
ATCAAAAAAT CTGAAAAAAA GCTTTCAACT TCAACTTTAG AGACCCTATC AATTATTGCT
TACAAACAGC CCATTACCAG AGCTGAAATT GATAAAATAA GGGGAGTGAA CTCTCAATCG
ACCATAGATT CTTTGATAGC TAGGGGACTT ATTGCAGAAA ATGGAAGGCT TGATAAGATT
GGCAAACCTA TTATATATAT CACTACAACA GAATTTCTAA AATACTTTAA CATAAAAAGC
CTAGAAGAAT TGCCAGAAAT CGACTTAGAG GGAGATAGCT ATGAGGATTA A
 
Protein sequence
MDKEYLKGLI EEILYIWAEP IDLEDLSAII FDFAKKDIKV ALEELIEERN SKKSGLIIRQ 
FDKSFQFTSR SCHDKYFEKV IKKSEKKLST STLETLSIIA YKQPITRAEI DKIRGVNSQS
TIDSLIARGL IAENGRLDKI GKPIIYITTT EFLKYFNIKS LEELPEIDLE GDSYED