| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_0585 |
|---|
| Symbol | |
|---|
| ID | 8397365 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | + |
|---|
| Start bp | 686621 |
|---|
| End bp | 687799 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 644994944 |
|---|
| Product | type II secretion system protein E |
|---|
| Protein accession | YP_003152350 |
|---|
| Protein GI | 257066094 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGAGG CAAGAGTGAT TGGGACAAAC ATAGATAAAT TTATCAAAAA TCTCATAAAA
AATGCCATAA AACTTAGGGC GAGCGACATT CACATCGAAG CCTTTGCCGA TTATTCAAAA
ATAAGGCTTA GGGTAGATGG AGAGCTTAGG GAATATATGA GGATAAATCT CTCCCAATAT
GAAAAGCTTG TAAGTAAAAT CAAGCTAATG GCAAAGATGG ATATATCAGA GAAAAGACGT
CCCCAAGATG CCAACCTAAG ACTAAAAGAA TTTGATGGAA TAGATTTTAG GGTATCGAGC
CTAAATACAG TAAATGGCGA AAAGATAGTC CTAAGGATCC TATCCATAGA TGAGTTTAAG
AAGACAAGTA GGCTCCTAGG ATTTTCTGAT TCTTCTATAG GAAAAATCGA CCAAGTCCTA
AAGAAAAGAT CCGGCATGAT AATATTTACA GGACCAACTG GATCAGGTAA GTCCACAAGT
CTTTATGCCC TCCTAAACAA ATTAAATACT GGTATGGAAA ACATCATAAG CGTAGAAGAC
CCTGTTGAAT ACAAGATCGA AGGAATTAAC CAAGTTTCTG TAAATGAGAA AATCGGTCTT
ACTTTCTCCA AATCTCTAAG GTCAATCCTA AGACAAGACC CCGACATAAT AATGATAGGA
GAAATAAGAG ATGGGGAAAC TGCCCAAATC GCCATAAGAG CAGCGATAAC AGGCCACATG
GTCCTAACAA CTCTTCACAC AAAAGATGCC CTCTCATCAA TCGTTAGACT TAAAGACTTA
GGATTAGAAG ACTATCTTAT AAGATCGGCC CTAAGTCTTT TGGCAAGTCA AAGATTAGTA
AGAAAGCTCT GCGATTGCAA AAAGAAAGAC ACCATGACAG ATAACGAATA CGAAATAGTA
AGCCAATACC AGAAAATCCC AAGAGATAAG ATAATCTACA GACCAAATGG CTGTGACAAA
TGCCAAAATG GCTACCTAGG AAGAGAAGCC GTGGAGGAAG TCATCCTAGT AGACAAAGAA
TTAAAAGAAA TTCTAAGAGA AGAAGGAGAT TCTACTAGTA AAGTAAAAGA AAAACTGAAA
AAAGAAGGCT TCAAATCAAT GCTAGAAAAC GGCATAGATA AAGTCCTAGA AGGGAAAACA
AGCTTTGAAG AAGTCCTTGG GGCTTTGGAT GTGGATTAG
|
|---|
| Protein sequence | MAEARVIGTN IDKFIKNLIK NAIKLRASDI HIEAFADYSK IRLRVDGELR EYMRINLSQY
EKLVSKIKLM AKMDISEKRR PQDANLRLKE FDGIDFRVSS LNTVNGEKIV LRILSIDEFK
KTSRLLGFSD SSIGKIDQVL KKRSGMIIFT GPTGSGKSTS LYALLNKLNT GMENIISVED
PVEYKIEGIN QVSVNEKIGL TFSKSLRSIL RQDPDIIMIG EIRDGETAQI AIRAAITGHM
VLTTLHTKDA LSSIVRLKDL GLEDYLIRSA LSLLASQRLV RKLCDCKKKD TMTDNEYEIV
SQYQKIPRDK IIYRPNGCDK CQNGYLGREA VEEVILVDKE LKEILREEGD STSKVKEKLK
KEGFKSMLEN GIDKVLEGKT SFEEVLGALD VD
|
|---|
| |