Gene Apre_0554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0554 
Symbol 
ID8397331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp641478 
End bp642263 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content38% 
IMG OID644994912 
Productprotein of unknown function DUF1212 
Protein accessionYP_003152321 
Protein GI257066065 
COG category[S] Function unknown 
COG ID[COG2966] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTACTG AAGCAATATC TAGCCTAGAT CAGGCTGTTA TCCTTTCAGA AATCGCATCC 
AACGCTGGAG CTATAATGCT AGCGAATGGA GCAGAAATTT ATAGGGTGGA GGATACAGTA
GAAAGAATAA TAAGAAGCAA AAAAAACATC AAAGATGTAG ATGTTTACTC TACTGCCAAT
GTCATAGTCC TATCTTTTTC CTTCAACCAG GAAATCCACA CCAACATCAG AAGAGTTAAG
TCTAGGACCT TTAACCTCTA CTATATAAAC AAGGTTAACT CATTTTCAAG AGAATTTGTA
AGCGGCAATT ACAGCCTACA GGAAGCCCTA AGAGAATTAA ATAAGATTAA AGAAGATCCT
GGTTACCCAC TAGCCTTTCA AATATTTGGT TCAGCCCTTT CTGCCGCTGC CTTTACAATC
CTATTGGGAG GAAAAATTAC AGATATGCTA ATATCTTTCT TAGTAGGATT TGTATCATAT
ATAGTAAGTT TTCAGTTTCA GGAGGCAAAG TTCGGCTTCT TTCTAGTAAA CTTTATTGCA
GGGCTCGTAG TAAGTTTAAT CACGGTAACT TTTAGACACT TCCTGCCTTA TATTGCAGTA
GATAAAATCG TAATAGGATC GATGATGGCC TTTCTTCCAG GAATCACTCT GACAAATGCC
ATGAGAGATC TGATGAGTGG GGATGTAACT AGTGGACTTA CTGGAGCTAC AACTGCTATC
TTAGTTTCTA CCGCACTAGC CCTTGGAGTT GCTATGCCAA TAACTATAGC AACTTACATT
AGATAA
 
Protein sequence
MTTEAISSLD QAVILSEIAS NAGAIMLANG AEIYRVEDTV ERIIRSKKNI KDVDVYSTAN 
VIVLSFSFNQ EIHTNIRRVK SRTFNLYYIN KVNSFSREFV SGNYSLQEAL RELNKIKEDP
GYPLAFQIFG SALSAAAFTI LLGGKITDML ISFLVGFVSY IVSFQFQEAK FGFFLVNFIA
GLVVSLITVT FRHFLPYIAV DKIVIGSMMA FLPGITLTNA MRDLMSGDVT SGLTGATTAI
LVSTALALGV AMPITIATYI R