| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_0345 |
|---|
| Symbol | |
|---|
| ID | 8397119 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | + |
|---|
| Start bp | 390104 |
|---|
| End bp | 390979 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 644994703 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_003152115 |
|---|
| Protein GI | 257065859 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGATT TTAGGATAGA AAGTTTTTTG GAAGTATGTA AATATATGAA TTTTACAAGG
GCTGCTGAAA GTCTTAATAT AACACAGCCA GCCATATCTA CTCATATTAA ATATTTAGAA
ACTTATTACA ATTGTAAACT TTTTTATAGA AATAAGAGGA ATTTGTGTCT AACAGATGAG
GGCAAGATTC TAAAATCTGC TTTACTTTCT ATGTCAAATG ATCAAGATAA GTTGAAGACG
ATATTATCTG AGAAAAAAAC TAAGAGTGAA AAAATTTCCT TGGGTTTTAC TAGGTCGGTA
GGAGAATATA TAATATTGGA TAAGCTTATA TCCTTGATTA AAGAAAAACC TTCTTGTGAT
TTCCATATTT ATTATGAAAA TACGGATGAG ATTTTAAGGG ATATTGATAG TGGGAGGATA
GACTTTGCTA TTATAGAGGG ATTTATAAAA TCTAGTGATT ATTTTATCAA AAAATACAAA
AGCGATAGGA TTGTTTGCAT CAGCCACAAG GACCACAAGT TTAAAAAACC AGTAAAAAAG
TTAACAGACT TATTAGATGA AAGAATTATT ATCAGAGAAG ACGGATCTGG TACCTTAGCT
ATATTAAAAA ATTTTCTAAG CATGGACAAT ATTGATACGA AAGATTTTGC AAATATCGTA
GAGATAAATA ATATGCGTTC CATAGTAGAA ATGCTAAGAT CGGATTGTGG CATAAGTTTT
ATTTTTGAAT CTTGTGTAAA AAAAGAACTA GAAGAAGGTA TTCTCAGGGT TATGGACCTA
GAAGATTTCA ATCTAGTTCA TGATTTGTCC CTTGTTGCCA GTAAAAATTC AATATTTACT
GATTTGTATT TGCAAATAGC TGAAGCTTTT TATTAG
|
|---|
| Protein sequence | MLDFRIESFL EVCKYMNFTR AAESLNITQP AISTHIKYLE TYYNCKLFYR NKRNLCLTDE
GKILKSALLS MSNDQDKLKT ILSEKKTKSE KISLGFTRSV GEYIILDKLI SLIKEKPSCD
FHIYYENTDE ILRDIDSGRI DFAIIEGFIK SSDYFIKKYK SDRIVCISHK DHKFKKPVKK
LTDLLDERII IREDGSGTLA ILKNFLSMDN IDTKDFANIV EINNMRSIVE MLRSDCGISF
IFESCVKKEL EEGILRVMDL EDFNLVHDLS LVASKNSIFT DLYLQIAEAF Y
|
|---|
| |