Gene Apre_0300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0300 
Symbol 
ID8397074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp335435 
End bp336448 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content41% 
IMG OID644994660 
Productaromatic amino acid beta-eliminating lyase/threonine aldolase 
Protein accessionYP_003152072 
Protein GI257065816 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2008] Threonine aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATTTTT TTGTTAATGA TTATAATTCG ATTTGCTATC CAGAAATCCT GAATGCTCTT 
AAAGAAAAAA TAGATGAAGC AAATATCGGT TACGGATTCG ACGATCACTG TGAAAATGCT
AGAGACCTAA TTCGAAAAGC TCTGGGTGAC TCTAGTGTAG ATATTCACTT TATCCCAGGG
GGGACTTCTG CCAATATCGT TGGTTTAAGT CTTGACATGC GCCAGCAAGA CTCAATCCTT
GCCCTGGAAA CTGGCCATAT CAAGGGCCAT GAGGCAGGAT CAATTGAGGC GACAGGTCTT
AAGGTCGAAC TTTGTCATTC CGATTCAGGA AAAATAAGTC GCCATATCCT AGAAAAAGAA
ATTGGAAAGT TTGACACTGA ATTTAGCACA AGACCCAAAA AGGTCTACAT CTCAAATACC
ACAGAGCTTG GAGAAGTCTA CACCAAGGCT GAGATTATGG ATATCTATGA TTTCTGCAAG
GCCAATGACA TGTATCTTTT TATAGATGGA GCAAGGATTG CGGCTGCTCT CGTCAGTGAA
AAGTGCGACT ATAGCCTAAA GGACTTGACC TCTATGTGCG ATATTTTCTA TCTGGGTGGA
ACCAAGGCGG GATTTCCTTT TGGTGAGGCC CTAGTTATAG TAAATGATAA GCTCAAAAAA
GATGCCCTAA AGCTAATCAA ACAAAAGGGA GCCATGCTTG CCAAGGGTTT TATCTCTGGA
ATCATGTGGG AGAGGGTCTT CTGTGAAGAT GACTTCTACC TAAGAGGAAG CAGAAAGGCT
TATGCCATGG CTAGAAATCT TGCCAAAGGG ATTGAAGCAA AGGGTTATGA GCTTACTTAT
CCCTTCGAGT CGAATCAGAT ATTTGTAAAC CTGTCTGATG AGGACCTAGA AAGATGGCAA
AAGATAGCCC AATTTGAAGT GATGGAGAAA CTAGAAGGAA CTAATATCGT AAGGCTTGTA
ACGACCTTTA GAACAAGTGA GAGCGATGTT AGAGGATTTT TGGAAGAGAT TTGA
 
Protein sequence
MYFFVNDYNS ICYPEILNAL KEKIDEANIG YGFDDHCENA RDLIRKALGD SSVDIHFIPG 
GTSANIVGLS LDMRQQDSIL ALETGHIKGH EAGSIEATGL KVELCHSDSG KISRHILEKE
IGKFDTEFST RPKKVYISNT TELGEVYTKA EIMDIYDFCK ANDMYLFIDG ARIAAALVSE
KCDYSLKDLT SMCDIFYLGG TKAGFPFGEA LVIVNDKLKK DALKLIKQKG AMLAKGFISG
IMWERVFCED DFYLRGSRKA YAMARNLAKG IEAKGYELTY PFESNQIFVN LSDEDLERWQ
KIAQFEVMEK LEGTNIVRLV TTFRTSESDV RGFLEEI