Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_0287 |
Symbol | |
ID | 8397061 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | + |
Start bp | 321525 |
End bp | 322247 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644994647 |
Product | ABC transporter related |
Protein accession | YP_003152059 |
Protein GI | 257065803 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGTCTAA TAGAAATCAG AGGGCTTAAG AAATATTACA AGCTAGGTGG TAATATCATA AAGGCCCTGG ATGGGATAGA CCTAGATATA GAAAAGGGCG AGTTTGTGGC TCTTTTGGGA ACGAGCGGTT CGGGTAAGTC TACCCTACTT AATATGCTCG CAGGTCTTGA AAGACCGACC AAGGGATCTA TAAAATACGG AAATATCTCC CTAACCGACC TTAACGAGGA ACAGATTACT AAATTTAGAA ACCTAAATAT AGGCTTTGTC TTCCAATCCT ACAATCTCCT TCCTTATCTA TCAGCCTGGG AGAATGTCTC CCTTCCCCTA ACCTTCAAGG GACTTAGTAG GGAGGAGAGA AAGAAGGAGG CCTACAAGAT CTTAAAGGAA GTGGGTCTTT CTGATAGGAT GGACAACAAG CCAAACGAGC TTTCCGGTGG TCAGCAACAA AGGGTCTCCA TAGCCCGTGC CTTTGTCGGT CTTCCAAAGA TTATCTTTGC CGATGAGCCA ACAGGAAATC TCGACACCAA GACGAGCTTT GAGATTATGA ATCTTATCAA AAAGATTACC AAAGAAAACC AGCAAACCTT TATTATGGTA ACCCACGATG ACGAGATGAC CGAGTTTGCT GACAAGGTGC TTTTTATGAG AGATGGACGT TTAGAGAAAA TTCACGAAAA ATACACAATT GACGAGGTAC TAGAAAATGA TGGCGAATCT TAA
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Protein sequence | MSLIEIRGLK KYYKLGGNII KALDGIDLDI EKGEFVALLG TSGSGKSTLL NMLAGLERPT KGSIKYGNIS LTDLNEEQIT KFRNLNIGFV FQSYNLLPYL SAWENVSLPL TFKGLSREER KKEAYKILKE VGLSDRMDNK PNELSGGQQQ RVSIARAFVG LPKIIFADEP TGNLDTKTSF EIMNLIKKIT KENQQTFIMV THDDEMTEFA DKVLFMRDGR LEKIHEKYTI DEVLENDGES
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