Gene Apre_0287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0287 
Symbol 
ID8397061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp321525 
End bp322247 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content42% 
IMG OID644994647 
ProductABC transporter related 
Protein accessionYP_003152059 
Protein GI257065803 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTCTAA TAGAAATCAG AGGGCTTAAG AAATATTACA AGCTAGGTGG TAATATCATA 
AAGGCCCTGG ATGGGATAGA CCTAGATATA GAAAAGGGCG AGTTTGTGGC TCTTTTGGGA
ACGAGCGGTT CGGGTAAGTC TACCCTACTT AATATGCTCG CAGGTCTTGA AAGACCGACC
AAGGGATCTA TAAAATACGG AAATATCTCC CTAACCGACC TTAACGAGGA ACAGATTACT
AAATTTAGAA ACCTAAATAT AGGCTTTGTC TTCCAATCCT ACAATCTCCT TCCTTATCTA
TCAGCCTGGG AGAATGTCTC CCTTCCCCTA ACCTTCAAGG GACTTAGTAG GGAGGAGAGA
AAGAAGGAGG CCTACAAGAT CTTAAAGGAA GTGGGTCTTT CTGATAGGAT GGACAACAAG
CCAAACGAGC TTTCCGGTGG TCAGCAACAA AGGGTCTCCA TAGCCCGTGC CTTTGTCGGT
CTTCCAAAGA TTATCTTTGC CGATGAGCCA ACAGGAAATC TCGACACCAA GACGAGCTTT
GAGATTATGA ATCTTATCAA AAAGATTACC AAAGAAAACC AGCAAACCTT TATTATGGTA
ACCCACGATG ACGAGATGAC CGAGTTTGCT GACAAGGTGC TTTTTATGAG AGATGGACGT
TTAGAGAAAA TTCACGAAAA ATACACAATT GACGAGGTAC TAGAAAATGA TGGCGAATCT
TAA
 
Protein sequence
MSLIEIRGLK KYYKLGGNII KALDGIDLDI EKGEFVALLG TSGSGKSTLL NMLAGLERPT 
KGSIKYGNIS LTDLNEEQIT KFRNLNIGFV FQSYNLLPYL SAWENVSLPL TFKGLSREER
KKEAYKILKE VGLSDRMDNK PNELSGGQQQ RVSIARAFVG LPKIIFADEP TGNLDTKTSF
EIMNLIKKIT KENQQTFIMV THDDEMTEFA DKVLFMRDGR LEKIHEKYTI DEVLENDGES