Gene Apre_0252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0252 
Symbol 
ID8397026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp285133 
End bp286203 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content37% 
IMG OID644994613 
ProductABC transporter related 
Protein accessionYP_003152025 
Protein GI257065769 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAATA TTGAAAATCT GAACAAAGTT TATGAAAATG GTTACGAGGC CTTAAAGTCT 
ATCAACTTAG ATATAGAAGA TGGAGCCTTG GTTACTCTCC TAGGTCCTTC TGGTTGCGGT
AAGTCTACTA TACTAAACAT AATAGCGGGC ATCCTTGATC CGACAAAGGG AGATATCAAG
TTTGATGGAG AAAGCGTAAT AAACAAACAC CCCAAGGACC GTGATATCGG CATGGTTTTC
CAAAACTACG CCCTCTATCC TCACATGACA GTCCTAGAAA ATATTATCTT TCCACTTACA
GTTGGAGATA AGAAAGTAAA AAAGCAAGAA GCGATCAAGA TTGCCCAAAA ATACATGGAT
CTTGCCTATA TTGGAGAGAT AAAGGATAAA AAGCCAGGAC AAATCTCTGG TGGCCAACAA
CAAAGAGTCG CCATAGCCCG TGCCCTTATC CAAAATCCAA AGACCCTTCT CCTAGATGAG
CCTTTAAGTA ACCTAGATGC TAGACTTAGA TTATCTATCA GAGAAGAGAT TAGAAATATA
GTAAAGGAAG TTGGAGTAAC TACGATTTTT GTAACTCACG ACCAGGAAGA GGCTCTTTCC
ATATCTGATT ACATAGCCTT GATGGACAAG GGAGTTATCC AACAATACGA CAAGCCACAA
AATCTCTACC TTGATCCAGC AAATCTCTTT GTTGCGAAAT TTATAGGAAA TCCTATTATA
AATATTTTTG AATTTGAAAA GAAGGGTGAT GACCTAATTT CGTCAGATCT AAAGCTTAAG
CTAGAGGATT TCGAGAAAGA AAGATTTAAA AAAGAGTTAA AGGATGGAGA TTACCTAGTA
GGCATTAGGC CAGAGCACTT CATCCTTGAT AATGAGAGTG ATATCAGGGT GAAGGTTGAT
TCTATAGAGA TGATTGGAAG ATATATGATC CTTCACTTCG ACTTAGACGA TGTATCTTCT
AAGATGATAG TAGATAGCAA GCTTAAGATT AAAGCAGGCG ATGAGATAGG AATTTATATA
GACTATCCAT CAATTTATAT TTTTGAAGAA GACGGAAGTA GGGTTTACTA A
 
Protein sequence
MINIENLNKV YENGYEALKS INLDIEDGAL VTLLGPSGCG KSTILNIIAG ILDPTKGDIK 
FDGESVINKH PKDRDIGMVF QNYALYPHMT VLENIIFPLT VGDKKVKKQE AIKIAQKYMD
LAYIGEIKDK KPGQISGGQQ QRVAIARALI QNPKTLLLDE PLSNLDARLR LSIREEIRNI
VKEVGVTTIF VTHDQEEALS ISDYIALMDK GVIQQYDKPQ NLYLDPANLF VAKFIGNPII
NIFEFEKKGD DLISSDLKLK LEDFEKERFK KELKDGDYLV GIRPEHFILD NESDIRVKVD
SIEMIGRYMI LHFDLDDVSS KMIVDSKLKI KAGDEIGIYI DYPSIYIFEE DGSRVY