Gene Apre_0222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0222 
Symbol 
ID8396996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp255650 
End bp256189 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content40% 
IMG OID644994583 
Productprotein of unknown function DUF955 
Protein accessionYP_003151995 
Protein GI257065739 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2856] Predicted Zn peptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAGTAT CCTACGATAG TATCTACAAA AAGGCGAGAG AGGTCATAGA TACCTACAAG 
TCAAGAGATC CTAGGGATAT CCTAGAAAGA AGAGGAGTCC ACCTTATAGC CTTTAAGTCA
AACACCAAAC TTTTAGGCAT GTATAAGATC ATTAAGGGAG TAAGTTTTGT CTTCTACAAT
CCTTTCGTAG ATGAGAGAAT CCAAAATATG GTCTTTGCCC ACGAGCTAGG CCACCATCTC
TTTCACGAGG ATGCCGCCGC CAATGATCTT ATAGAGTATG AGCTTTTCGA TATAAATTCA
GAAATGGAGC TTGAGGCTAA TATCTTTGCA GCCCACCTCC TCTTAGATGA AAACTGCCTT
ATCGAGGACG TGAAGGAAGG CTATACCTAC AATCAACTCG CCAGTATGTA TGATGTAAAT
GTAAATCTTA TGATCTTTAA GTTAAACGAA ATGCACAGGA TGGGTATGCC TATAAGAAAG
GAAAGCCCCT CAAGCTCGAC CTTTTTTAGG GATATAGAAG ATTGTAAGTG TAATTACTAA
 
Protein sequence
MGVSYDSIYK KAREVIDTYK SRDPRDILER RGVHLIAFKS NTKLLGMYKI IKGVSFVFYN 
PFVDERIQNM VFAHELGHHL FHEDAAANDL IEYELFDINS EMELEANIFA AHLLLDENCL
IEDVKEGYTY NQLASMYDVN VNLMIFKLNE MHRMGMPIRK ESPSSSTFFR DIEDCKCNY