Gene Apre_0215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0215 
Symbol 
ID8396989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp247940 
End bp249532 
Gene Length1593 bp 
Protein Length530 aa 
Translation table11 
GC content33% 
IMG OID644994576 
ProductABC transporter related 
Protein accessionYP_003151988 
Protein GI257065732 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGT ATATTCTCAG ATATAAGAAG AATCTGATTT TGTCGGTTAT TTTTGGTGTA 
ATTGAAGTTT ATTTTATCTA CTTATATTGC ACAGTTAGTA CTAAAATAAT AGATGTCGTT
TTGGGGAATA TCGAGGGAAG TGCTAGTAAG ATTGTTATTC ATTCAATTTT GTATGTTCTT
ATTGCCTGTC TATCATATTA TATATCCCAG AGAAACGGCA AGCTCTTTAC CCAATACATA
TCTAGCGACT TAAGGCATGA TTATTTGGAA GGAATAATTA ATACCAAGTC ATCTAGCTTT
TTTGGGAAAA ATAAGGGAGA ATACATCACC CAAGTAGATC AGAATGTCGA TCAGTTAAGG
TTAAATTATT TGATGACTTT ACCATCCGCA ATAATTGGTA TAGGACAAGC CATAGTATAC
ATAATAGGCC TCTATAAGAT TCATCCTTAT ATTCTCTTAG CTACCATATT TTTTGTTATT
TTTCCTGGGG GAGTTTCTAA AGTTTTTTCT AAGAGGATTT CAGATTTGCA AATTTTAAGG
TCTGAGAATT ACTCATCTTA TATTGATAGA TTGAATGAAT TTCTAGATGG ATATTTTGTA
ATTAAGGAAT CAAAGAATAA AGAATACTTT TTAAAGAAAT TCGATATAGA TGATAATAAG
TTATTGAAAT CTTTGACCCA TCTAAATGTT TCCATTAGCA TGTTTGGTCA AACTCTTTTT
AGTATTAATA TTTTATCGTC TTTGTTAGTT ACATATATTT GTAGTATTAT GGTGAAAAAT
CAATACTTAC AATTATCAGA TCTCTTAGCT TCTCTAAAGT TAGTTTCGAT TTCTACAGCG
ACTTTAGCAG ATTCTTTTGG ATATTTGGTT AACATTTTAT CTACAAAGAA GATAAAGGAG
ATGGTAATTA GTGAAATTCC TGATATAGAA GAGAGCAAGA AAGAAGGAAA GACTCCACAA
CTAGACCTTA AACTAAACAA TCTATCATTC GCCTATGGAG ATATCAAGGT CTTTGATAAG
ATGGATTTGG ATATAGAAAA AGCTAAGTCA TATGCTATAA TCGGAAATTC CGGATCTGGT
AAGTCTACTC TTGCCAAGAT TCTTATGAAG GTAAATGAAG ACTATGGGGG AGAGATTTCC
TTTGCTAATG GCGACTTCAA AGAATTTTCG GAAGAAGACT TATATGATAA TATCTACTAT
ATTCCACAAA ATCCTATAGT ATTTGAGGAT ACTTTCATAA ACAATATCGC TATGGGCGAT
GATGGGATTG ATAGAGATAG GATCGAAGGA ATTATCGATA GGGTAGGATT AAGTCGAGTT
TATCATGAGA AGAAGGATGG ATTAATCAAA AATGGAAGTC TATCTGGTGG AGAGAAGAAG
AAGCTAGAGC TTGCTAGGGC CCTATACAAG GGAAGTGATT TACTTATCTT TGATGAGCCA
ACAAGTGGGC TTGACCCAGA AAGCGCTAGG TCAATCGAAG GCTTAATAGA AAGCCTAGAT
AGGCTAACAA GAATAGTAAT CACCCACAAC CAAGACCCAG CCTATCTTCA AAGCTTCGAC
CATGTGATAA ATATTGAAGA TTACAAAAGT TAG
 
Protein sequence
MKKYILRYKK NLILSVIFGV IEVYFIYLYC TVSTKIIDVV LGNIEGSASK IVIHSILYVL 
IACLSYYISQ RNGKLFTQYI SSDLRHDYLE GIINTKSSSF FGKNKGEYIT QVDQNVDQLR
LNYLMTLPSA IIGIGQAIVY IIGLYKIHPY ILLATIFFVI FPGGVSKVFS KRISDLQILR
SENYSSYIDR LNEFLDGYFV IKESKNKEYF LKKFDIDDNK LLKSLTHLNV SISMFGQTLF
SINILSSLLV TYICSIMVKN QYLQLSDLLA SLKLVSISTA TLADSFGYLV NILSTKKIKE
MVISEIPDIE ESKKEGKTPQ LDLKLNNLSF AYGDIKVFDK MDLDIEKAKS YAIIGNSGSG
KSTLAKILMK VNEDYGGEIS FANGDFKEFS EEDLYDNIYY IPQNPIVFED TFINNIAMGD
DGIDRDRIEG IIDRVGLSRV YHEKKDGLIK NGSLSGGEKK KLELARALYK GSDLLIFDEP
TSGLDPESAR SIEGLIESLD RLTRIVITHN QDPAYLQSFD HVINIEDYKS