Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Apre_0151 |
Symbol | |
ID | 8396902 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaerococcus prevotii DSM 20548 |
Kingdom | Bacteria |
Replicon accession | NC_013171 |
Strand | - |
Start bp | 180801 |
End bp | 181532 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 644994489 |
Product | transcriptional regulator, RpiR family |
Protein accession | YP_003151924 |
Protein GI | 257065668 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAATG CTAATTACAA TTTTATTATG GACATAATAA GCTCAAAAAA TATAAAGTTA TCTAAGTCAG AAAATATTAT CGTTGATAAA ATCAAAGATA TAAATGTCGA CTTTAGTCAT ATAAATATCA ATGACTTATC CGAAATCCTT AAAGTCTCAA ACTCCACCAT TACAAGGTTT GCCCAAAAGC TTGGATTTGA TGGTTTCTCT GAGCTTAAGT TTGATATTTC TAAAAAACCT AGAAGGACTA AGTCCCTTAG CCAAGAGATT TATATTAATT TTATTAATTC TATCGAAGCC TTCGATGAGA AAACTCTTAG CTTTATCAAA TCTTTTGATA GTTTCGGAAG GATTGCCGTT ATAGGAATAG GTTCGTCTGG TCTTTGTGCC AATGAATTCG TCTACAAATT CGGAGAAATC GGCCTAAATA ATACCGACTA CGCCAAAGAG CCTTACAGTA TAAATCTACT TACTAAAAGT CTTGATGCGA AAGACTTATT GATAGCCATA TCACTTTCTG GAGAAAACAA CAATCTCCTA GAAGGAGTTC GCTTTGCAAA AGATAAAAAT GCAAATATCC TCGCCATAAC TGGCAATAAT GAGTCTACTC TTAAAAATAT AGCGACAAAC ACTATCTTAT TGCCTCCCTA TCCAAGCTAT TCTTACAAGA TTTCAAAGAT TTTTCCTGTA ACCTTAATCC TCGATATGAT TTGTGAAGCC TATCTTAGCT AG
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Protein sequence | MTNANYNFIM DIISSKNIKL SKSENIIVDK IKDINVDFSH ININDLSEIL KVSNSTITRF AQKLGFDGFS ELKFDISKKP RRTKSLSQEI YINFINSIEA FDEKTLSFIK SFDSFGRIAV IGIGSSGLCA NEFVYKFGEI GLNNTDYAKE PYSINLLTKS LDAKDLLIAI SLSGENNNLL EGVRFAKDKN ANILAITGNN ESTLKNIATN TILLPPYPSY SYKISKIFPV TLILDMICEA YLS
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