Gene Apre_0151 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagApre_0151 
Symbol 
ID8396902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaerococcus prevotii DSM 20548 
KingdomBacteria 
Replicon accessionNC_013171 
Strand
Start bp180801 
End bp181532 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content33% 
IMG OID644994489 
Producttranscriptional regulator, RpiR family 
Protein accessionYP_003151924 
Protein GI257065668 
COG category[K] Transcription 
COG ID[COG1737] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAATG CTAATTACAA TTTTATTATG GACATAATAA GCTCAAAAAA TATAAAGTTA 
TCTAAGTCAG AAAATATTAT CGTTGATAAA ATCAAAGATA TAAATGTCGA CTTTAGTCAT
ATAAATATCA ATGACTTATC CGAAATCCTT AAAGTCTCAA ACTCCACCAT TACAAGGTTT
GCCCAAAAGC TTGGATTTGA TGGTTTCTCT GAGCTTAAGT TTGATATTTC TAAAAAACCT
AGAAGGACTA AGTCCCTTAG CCAAGAGATT TATATTAATT TTATTAATTC TATCGAAGCC
TTCGATGAGA AAACTCTTAG CTTTATCAAA TCTTTTGATA GTTTCGGAAG GATTGCCGTT
ATAGGAATAG GTTCGTCTGG TCTTTGTGCC AATGAATTCG TCTACAAATT CGGAGAAATC
GGCCTAAATA ATACCGACTA CGCCAAAGAG CCTTACAGTA TAAATCTACT TACTAAAAGT
CTTGATGCGA AAGACTTATT GATAGCCATA TCACTTTCTG GAGAAAACAA CAATCTCCTA
GAAGGAGTTC GCTTTGCAAA AGATAAAAAT GCAAATATCC TCGCCATAAC TGGCAATAAT
GAGTCTACTC TTAAAAATAT AGCGACAAAC ACTATCTTAT TGCCTCCCTA TCCAAGCTAT
TCTTACAAGA TTTCAAAGAT TTTTCCTGTA ACCTTAATCC TCGATATGAT TTGTGAAGCC
TATCTTAGCT AG
 
Protein sequence
MTNANYNFIM DIISSKNIKL SKSENIIVDK IKDINVDFSH ININDLSEIL KVSNSTITRF 
AQKLGFDGFS ELKFDISKKP RRTKSLSQEI YINFINSIEA FDEKTLSFIK SFDSFGRIAV
IGIGSSGLCA NEFVYKFGEI GLNNTDYAKE PYSINLLTKS LDAKDLLIAI SLSGENNNLL
EGVRFAKDKN ANILAITGNN ESTLKNIATN TILLPPYPSY SYKISKIFPV TLILDMICEA
YLS