| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Apre_0147 |
|---|
| Symbol | |
|---|
| ID | 8396898 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaerococcus prevotii DSM 20548 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013171 |
|---|
| Strand | + |
|---|
| Start bp | 174029 |
|---|
| End bp | 175501 |
|---|
| Gene Length | 1473 bp |
|---|
| Protein Length | 490 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 644994485 |
|---|
| Product | extracellular solute-binding protein family 1 |
|---|
| Protein accession | YP_003151920 |
|---|
| Protein GI | 257065664 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTAC TAAAAAAACT TAGCATAAGC ACACTCCTAG TTGGACTTAG CTTAAGTCTT
TCTAGCTGCA CAGCTTCCGA TAATAAAGAA AAGTCCAAAA AAGCTTCAGA AGAGCTTCCT
ACCATAACTT ATTATGATGT AGGAACTCCA CAAGAAGATA CAGGAGAGGT GGTAGAAGCT
ATAAATGAAT ATCTAGATAA ATCTGATGCA GGATATCACC TAAACCTACA ATTTTTCGAT
TGGGGCGAAT ATGAACAAAG ACTTCAGCTT GCGTCAAATG CGGGAGATGA CTGGGATATA
GCCTTTACAG CTAACTGGTC TGGTCCTTAT AAAAACTTGG TAGAGAAGGG AGCCTTTGCT
GACATAACGG ATCTTATAGA TGAAAAAGGT CAAGCTATAA AAGATTCTCT TTCAGAAGAC
GTATTAAAGG GAGCTTCTAT TGAAGGAAGA CTATATGGTG CGCCAGCAGC TGCTAAAAAT
GTTGTTCCAG GCAATTATTT CGTTTGGAAT AAAGCTTATG TAGATAAATA TAAGATTGAT
ATAGATAGTG TAAAGACTAT AAAAGACCTT GAACCTTATC TTAAAGAGGT CAAGGAAAAT
GAAGCGAGCG TCGATTATCC TTTCAACATA GTAAGTGATT TCCTCCTTCA AACACCAACT
CCACAGTCTG AAGCGACACC AGGAGTTGCC GTAAAAGAAG AAAATGGAAA GCTCATCGCC
TACAATAGCT GGGCTGACCC AGAGCTTAAG AAACAATTAG ACGTCCTAAA AGACTACATG
GACAAGGGTT ATATTAACCC ATCAGCTCCT CAGATGAATG CGGGAGATGG AGAAGAAGGT
GATAGGTGGC TAGTAACAAA AGCCGAAGGA GGTCCAGATT CGGATGGGAT TTGGTCTAAC
TCCTTCAAGA GCGAAGTCAT ATCCTCCCCA GCAGGTAACA AAACAATAGT AACAAATCAA
AAAGCTACTG GTTCTCTTGC CGCTATTAAC TCCCAATCTG AGCACAAAGA ATTGGCTATG
GATTTTCTAA ATAGAATGTA TAGCGATAAG GAGCTTATGA GATATCTAAC CTATGGAATA
GAAGGCAAGC ACTATGATTT AGTAGATGGA AAGGTTGAAA AGTACGAAGA TACTAAATAT
GACGTACCAG CCTTTACCTT CCTAGCCTCT GAAAATATGA CACCACTTAC TACATCTGAA
GATTCTGACA CGCCAGAAGC TAAGGAAAAA CTAGATAAGT TTTTAGAGAA TTTAGAGCCT
TCTCCTATAC TAGGTTTCAA CTTTGATAGG AAAAGCGTTG AAAGCGAGGC AGGAAATGTT
GAACAGACAA TTTTCGAATA CGAGAAAAAT CTCAAAACAG GTGCCTTTGA TGAAGACTAT
TATCAAGAAT TCTTAGATAA GCTTAATACT GCTGGAATTG ATAAGTTGAT AGAAGAAGTC
CAAAACCAAT TAGATAATTG GGATAGGAAA TAG
|
|---|
| Protein sequence | MNLLKKLSIS TLLVGLSLSL SSCTASDNKE KSKKASEELP TITYYDVGTP QEDTGEVVEA
INEYLDKSDA GYHLNLQFFD WGEYEQRLQL ASNAGDDWDI AFTANWSGPY KNLVEKGAFA
DITDLIDEKG QAIKDSLSED VLKGASIEGR LYGAPAAAKN VVPGNYFVWN KAYVDKYKID
IDSVKTIKDL EPYLKEVKEN EASVDYPFNI VSDFLLQTPT PQSEATPGVA VKEENGKLIA
YNSWADPELK KQLDVLKDYM DKGYINPSAP QMNAGDGEEG DRWLVTKAEG GPDSDGIWSN
SFKSEVISSP AGNKTIVTNQ KATGSLAAIN SQSEHKELAM DFLNRMYSDK ELMRYLTYGI
EGKHYDLVDG KVEKYEDTKY DVPAFTFLAS ENMTPLTTSE DSDTPEAKEK LDKFLENLEP
SPILGFNFDR KSVESEAGNV EQTIFEYEKN LKTGAFDEDY YQEFLDKLNT AGIDKLIEEV
QNQLDNWDRK
|
|---|
| |