Gene Ccur_12610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcur_12610 
Symbol 
ID8375466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptobacterium curtum DSM 15641 
KingdomBacteria 
Replicon accessionNC_013170 
Strand
Start bp1429479 
End bp1430627 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content52% 
IMG OID644994178 
ProducttRNA-guanine transglycosylase 
Protein accessionYP_003151624 
Protein GI256827665 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0343] Queuine/archaeosine tRNA-ribosyltransferase 
TIGRFAM ID[TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones161 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTAT TTGATCTAAC GATTGATGCA CAAAGCGGTC ATGCACGTGC AACCACCTAT 
CAGACAGCGC ACGGTTCATT TACAACGCCG TTGTTTATGC CGGTTGGTAC GCACGCCACG
GTAAAGGGCA TTATGCCCGA CATGCTCAAA CAACTACAAA GCCAGGTTGT TCTTGCGAAT
ACCTATCATT TATATATGCG CCCTGGTGTC GATGTCGTCG AAGAAGCGGG CGGCGTTCAA
AAATTCATGC ATTACGATGG ACCCATGCTT ACCGATTCAG GCGGGTTTCA ACTGTTCAGT
CTTGATCACA TGATGAAGGT TGATGGCGAC GGCGTTAGTT TTCAAGCGCG TGATTACGAC
GGCAGCCGTC ATCGGTGGAC ACCTGAAGCT AACATGCGCA TTCAGGAGCG TTTAGGTGCC
GACATTGCGA TGCAGCTTGA TCAGTGCATT GGCTATCCTG CCGAAAAGAG TGCGGTTGCG
GCGTCGACAA AGCTTTCGTG GGAATGGGCA CGTCGCTGTT GTGATGCCCA TGTACGACCT
GATCAAGCGC TTTTCGGTAT TGTGCAGGGT GGTATGCACC TTGATCTTCG ACTGGAAAGC
GTCAATCGGC TGGCTACCAT TGATAAGGAA AGTCGCAACC AGGGAGGGCG CGGCTTTCAG
GGCTGGGGTA TCGGCGGATA TTCAGTGGGC GAGCCACATG ATGTCATGTT TGCAACGCTT
GGCCAGGTTG CTCGTTCGCT GCCCGACCAT ATGCCGCGCT ATCTCATGGG CGTGGGTAAT
CCAACAACGC TTGTGCGCGC GGTGCGTGAA GGGGTGGACA TGTTCGATTG TGTGCTGCCC
ACGCGCACAG GACGCATGGG AACGGCGTTT TCGAGTACGG GACGCATGAA TCTACGTAAT
GCACGTTATA CGCACGATTT CACGCCACTT GACCATGAAT GTACCTGCCC AGTATGCACG
CAATTTACCA GGGCCTATAT TCGTCATTTG GTTAAACAGG GCGAAATGCT CGGTGGCATT
TTATTGTCGA TGCATAACAT TTATTTTCTT ACCGATTTGA TGCGTCGAGC ACGCGAGGCT
ATTTTGGCTG ATGCTTACGA AGAGTTTTAC GCTGCATGGA TGGCAAGCCC TGCCGCAAAG
GACTATTAG
 
Protein sequence
MSLFDLTIDA QSGHARATTY QTAHGSFTTP LFMPVGTHAT VKGIMPDMLK QLQSQVVLAN 
TYHLYMRPGV DVVEEAGGVQ KFMHYDGPML TDSGGFQLFS LDHMMKVDGD GVSFQARDYD
GSRHRWTPEA NMRIQERLGA DIAMQLDQCI GYPAEKSAVA ASTKLSWEWA RRCCDAHVRP
DQALFGIVQG GMHLDLRLES VNRLATIDKE SRNQGGRGFQ GWGIGGYSVG EPHDVMFATL
GQVARSLPDH MPRYLMGVGN PTTLVRAVRE GVDMFDCVLP TRTGRMGTAF SSTGRMNLRN
ARYTHDFTPL DHECTCPVCT QFTRAYIRHL VKQGEMLGGI LLSMHNIYFL TDLMRRAREA
ILADAYEEFY AAWMASPAAK DY