Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccur_12000 |
Symbol | |
ID | 8375406 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cryptobacterium curtum DSM 15641 |
Kingdom | Bacteria |
Replicon accession | NC_013170 |
Strand | - |
Start bp | 1362837 |
End bp | 1366259 |
Gene Length | 3423 bp |
Protein Length | 1140 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644994118 |
Product | membrane protein YfhO |
Protein accession | YP_003151567 |
Protein GI | 256827608 |
COG category | [S] Function unknown |
COG ID | [COG4485] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 140 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGGGCGC ACGCCGTGCA AACGAACAGT CTGTATGCCA GACAGCCTTC TGCAAAGCGA CCCGCTGCGC AACAAGTTCA ACATTCTCGA AGGGTTTCAC CTATCCAACA GGCCAAGCAG GTTCGACAGC GCCCTACCCA TTGTCTTGCA GGATTGATAC ACCGCGCTGC TTCACCTGTG GCAGTGCTCC TTATATTTCT GTGTATGGCG CTTATGTTAC ACTTTTTGTT TTTGCCTCAG TTTGCAGGCT TGCCCTTCGT GGGATTTACT TACGACGGTG GTGATGCGTC AGCCCAGTTG ATTCCTGCTG TATCACTACT CGAGCGAAGC CTGATGGATG GCACGTTTTT CTGGTCGTGG GATTACGGCC TGGGCGGCGA TCTCTTTTCT GAGTTTTCGT ATTATTATTC GACGTCGCCC CTTTTCTACC TGCAATTCAG TATCAAATGG CTTTTTGGCG CCGCAGGTGG GGATTTCGCC ACTACTCAAG CATGGCGCGT GGTGTTCAGC ATTATTAAGC AGATTCTCTG CATGCTGTTC ATGTATCTTC TTATCAGGCG TGAAGGAAAG GGTCGCCTTG CTGCTCTAAC AGCTGGCATC CTGTATGGCT GTTCATTCTG GTACATCGAT AATTCAGTAG CTTTTGACTT TATGACCGAC GCCATGCTGT GGCCGCCGCT TTTGGTTATG GCTTTTAATC GCTGGAATCG CACCGGTTCG TGGATGCCAC TTTGCCTTGT GCTCGCGCTG TCTATTGCGA GTAATTTTTA CTTTGGCTAC ATTGTGTGCG TGTTCTGCAT CTTGTTTGCG CTGGTGTTTG CCTATCGTGG AGAAAACGGG CAGAAATGGG CTGCTTTTAT TCGCGGATAT CTGCGACGTC TTGGTGTGTT GGCGCTGGTA GCGATAGGTG CTATCCTGCT TTCATCAATT GCTTTTATTC CCTCTGTCAT TGCATTACTT TCAGCTGATC GTGCGCAAGT TCCCCTGCAG GTGGGTATTT TTCCGTCGCT GCATTTTGTG AAAGCATTGC CGGAGATTCT GTTTTTCAAG GGGGGTATGT TTTCGGCAAA TGATGCGCAG ACGTATGCAT TTCCTCTTAT TGCTATGTTG GCACCATTTC TGTTCAAACA TTTGTCACCA GCTGGGCGCA AGAGGACTAT TTTTGCGGCG CTTCTTGTTT TGCTCTGGTT ACTGCCGGTT GTATCAAGCT TGATGAACGG CTTATCGTAC CCGTCAAACC GCTGGTGCTA TCTCGTGGTG TTTGCAGTGG CCTATGCGGT GCCCGATTGG ATTGAATGCC TTGCAACAAA AGGTATTCGA GCTGTTCGTC CAGTGGTTTT TGTTGGGTTG GCTGTGCTGG CACTTGTTGT TTTGGCAACC CATAATGTGC GAGTACAAGA TCTCAGCGGT GCGCCGGGTT ATGTGTTCCA GCTCCTTGGT ATATCTGACT TGGTATTTTT TGGGCTGCAA GTTGCCTTTA TCGCAGTTAT TTTGCTCAAA GGAACACGAC AGCAAACAAA TGGGGCAGCT CGAGTGCATG GAGTGCCTCT TTCGGCAGCG GCATTGGCAC TACTTGCTGG TGCGGTTTTG TTGGCTATGC CATTTGGACC ATATGCGGCC TATGCAGGGT TTCGCGATAT GGGTGGAGCG GTTACCTTTT CGTCGCCCGA ACAACTTAAC AAAACATTTG AAGGCGACAC GAGCAATCAA GAGACATATC GCCTTTTGGC TCAGGCTGGG GCTGAATTTG AAGCTGGGGT CAAGACTAAG ACCGAACCCA GGGTTGCAGC TCATGTTCAG ATTGATACTG ATGCTAATGC TGGTGTTGAT GCTAATTCTG GCACCGACTC TATTGATGCT AACAATACGT TCTTCCGTAC AGCAGATGAA GAAACTTATC AAGATGATGC TAACTATCGT CGCTTTGAAA ATCGTTCGTG GATCCTGGGC ACTCATCCAG TGAGTGTTTA CAATTCCCTG ATCACCAAGG ATATTAGCCA GTGGATCAAG CGCGAGCGGC AGGTAACTCC GACAACGCGG TCAGCCTCCC AGTATCGTGG GTTTGGGCAT CGACTTTTTA TTGAGAACGC ATGGGGTATT GAGTATAAAT TCAACACCAC CGAAGCGAGC AATCTCTATG GGTATGAGCC ACTTGATGAT AGCAGTCACG AATCGCTCGG CGATACTTCC CAGGTACTTG GTGCTCAAGA TGCTTCGAAT GAGAACGCTA GCCAGACAAA TATCTCGCAT ACAAATACTT CTCAGACGAA TGCCCCTTCA AGCGACGAGG CAACCGAAGG GAAAACGACT GAGGGTAAAA CAACCGCGGA CAAGACCACC ATGGACAAGG TCACCGCGTC AACCAAAGAA ATCTGGCGCA ACCGCTATGC TACCGGTATC GATCTATGGT ACTCGACAGC AACTGCAAAA AGCAGCACAC CTACCTGGAG TTTTGAAGAA AGCGATGCAG CCTTACTACA AACAGCAGTT GTTGACGATG ACGTGGCCAA TCGCCTCGCG CTGCCAAGTG GTACCCTTGA GTCGACGGTA ACCGTTCTTC CTCTTGATAA TTCGAATACA CACTTCGACA ATTGTTCACT TTCAAACGGG ATTTTGCAGG TTGATTCAGG TGGGGGATCG ATAACTATCG ATCTTCCCGA TAATCTCGGC AGTGGTGAGT GCTTGCTTTC TTTCACGCTT AAGAATACAC AGGAAGAATC GTTCACGTTC CGTGTTAATG GCGAAGAGTA CTGGCAAGGT GGAAAGACGC ATCGCTGGCG GTATCCGATC GATAATTACT CTCTCTGTTT TCCCGAACCG GAAGGCTCTC TCAAGGTCAA TATTTCTGCG GGAACGTACA CAGTAGACAA TGTGCAGCTT GAGTTTGGGT CATACAGCCG ACTTGCTGAT TGGACTAACT CGGTAAATCG GTATGGATTG GCTGATCTTA CCGTCGGAAA AAGCAGCATT ACAGGTACCA TTCATACAGA TGAAGCAGGC ATTTTGGCTT TAGCAATTCC CTATAAAAAG GGGTGGACCT GCTTAGTTGA CGGTAAGCCG GCAGATTCCT TTGTGGTAAA CGGAATATTC GCCGGAGTCT TTCTTGATGC GGGGGATCAC ACCGTACAGT GGAGCTATGC TAACCCCTAT TTTCCTTTTG CTGCAGGACT GAGCATCTTG ACAGGTATGG CTCTTGCAGC GATATGGTAT TTTAGGCGGC GAAAATCTGG GTCTAATGTA CTTACTCGCA AGCAGATAGC GCGTCCGTCG GTACCGTCAT GCTCACAGTC ACGCGTACGG TCACACTCAC CACACTTACT TGAAAACGAC CTTGCGAAAC AACACGAAGT TCCACGCCAC AATGCAGACC ATAGTAGCGA GCTTAGCAAC AAGCGGCATA ATGCCGACAC CAGTCATATA TGA
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Protein sequence | MRAHAVQTNS LYARQPSAKR PAAQQVQHSR RVSPIQQAKQ VRQRPTHCLA GLIHRAASPV AVLLIFLCMA LMLHFLFLPQ FAGLPFVGFT YDGGDASAQL IPAVSLLERS LMDGTFFWSW DYGLGGDLFS EFSYYYSTSP LFYLQFSIKW LFGAAGGDFA TTQAWRVVFS IIKQILCMLF MYLLIRREGK GRLAALTAGI LYGCSFWYID NSVAFDFMTD AMLWPPLLVM AFNRWNRTGS WMPLCLVLAL SIASNFYFGY IVCVFCILFA LVFAYRGENG QKWAAFIRGY LRRLGVLALV AIGAILLSSI AFIPSVIALL SADRAQVPLQ VGIFPSLHFV KALPEILFFK GGMFSANDAQ TYAFPLIAML APFLFKHLSP AGRKRTIFAA LLVLLWLLPV VSSLMNGLSY PSNRWCYLVV FAVAYAVPDW IECLATKGIR AVRPVVFVGL AVLALVVLAT HNVRVQDLSG APGYVFQLLG ISDLVFFGLQ VAFIAVILLK GTRQQTNGAA RVHGVPLSAA ALALLAGAVL LAMPFGPYAA YAGFRDMGGA VTFSSPEQLN KTFEGDTSNQ ETYRLLAQAG AEFEAGVKTK TEPRVAAHVQ IDTDANAGVD ANSGTDSIDA NNTFFRTADE ETYQDDANYR RFENRSWILG THPVSVYNSL ITKDISQWIK RERQVTPTTR SASQYRGFGH RLFIENAWGI EYKFNTTEAS NLYGYEPLDD SSHESLGDTS QVLGAQDASN ENASQTNISH TNTSQTNAPS SDEATEGKTT EGKTTADKTT MDKVTASTKE IWRNRYATGI DLWYSTATAK SSTPTWSFEE SDAALLQTAV VDDDVANRLA LPSGTLESTV TVLPLDNSNT HFDNCSLSNG ILQVDSGGGS ITIDLPDNLG SGECLLSFTL KNTQEESFTF RVNGEEYWQG GKTHRWRYPI DNYSLCFPEP EGSLKVNISA GTYTVDNVQL EFGSYSRLAD WTNSVNRYGL ADLTVGKSSI TGTIHTDEAG ILALAIPYKK GWTCLVDGKP ADSFVVNGIF AGVFLDAGDH TVQWSYANPY FPFAAGLSIL TGMALAAIWY FRRRKSGSNV LTRKQIARPS VPSCSQSRVR SHSPHLLEND LAKQHEVPRH NADHSSELSN KRHNADTSHI
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