Gene Ccur_10510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcur_10510 
Symbol 
ID8375258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptobacterium curtum DSM 15641 
KingdomBacteria 
Replicon accessionNC_013170 
Strand
Start bp1195009 
End bp1196511 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content52% 
IMG OID644993973 
Productarabinose efflux permease family protein 
Protein accessionYP_003151424 
Protein GI256827465 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.67129 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones123 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACCG ACGGAGAGAA ACCACCCGTT GACAGGGAGC ATGCCGCTCA CACCTCTAAA 
ACACCTGAAA ACAACGCTGT CTTCACTACA GAAAAAGACG CTGTCTTCGT TGCAACAGAC
AACAGCACCT TCGCCACAAC AGATAACAAC ACGGTTGCTA CAACGACAAA TGGCAACCGG
AAGCCGTTTT ACGGATGGGG AATTGTTGCG GCTGGCTTCT TGTTAATGGC AACCTGCTAC
ACGGTATTTG TCAACTGCAT TCCTCTCTTC CAAACTCACA TCGTTCGCGA TCTTGGTATA
ACGGTCGGCC AGTTCAACAC CGGCGTTTCG CTCTGCACGG TCGTTGCTGT GTTTGCATCA
CTTGCCATCG GTAAGCTTAT CGATATCTGG GATGTCCGTA TTTTAGGCAC CTTCACCGTT
CTCTGTGCCT TCGTGGTGCT CATTGGGTTT TCGCTCGCAA CGCAGCTTTG GCATCTCTAT
GTGCTCTGCA TTTTAGCCGG CATGATTGTA GTAGCTGGTA CGCGTCTTCT TTCAAGTGTC
ATTATTGCCA ATTGGTTTAC GTTAAAACGC GGGCTGGCCG TCTCGATTGC ACTTTCTGGA
TCGGGTGTCG GTGGCGTGGT GCTTTCACCT ATTACCAGCA TGCTTATTAC TGGTTTTGGC
TGGCGCAGCG CCTTTGGAAC GCTGGCTTTT GTCTGCCTTG TGCTGGGGTT ACCTCTTGTG
CTGGTGTTTT TCCGTAACCA TCCAAGCGAT AAGGGTCTTT TGCCCTATGG AGCTGGCCAG
GTAGAGCAAA CCCACGTTGA TCGGTCGCCC GATAAGCCCG TTTCTGTCGC GCTTGGTTGG
AAGGTGCTCA AGAAAAGTCG TGCCTTCTGG CTGATGACAG CTGGCTTCGT CATGATGGGC
ATCGACAATG GGGCCATTAT TACTAATGCG GTTTCAAACA TGACCTTCGT CGAATTGCAT
GGCACAACGG TGGTTACCGG CGGACATGAC ACATTATGGG CAGGCAACGT ATGGGCATTC
TACCTTGCCT GCGTAATTGT GTTTAAGGTG CTACTAGGTG CCATCTATGA CCGCTGGGGT
ATGCGCACCG GCACACTCAT TGGAACAGCC ACATCGCTTG CTGCGGCGGT AGCGTTGTGC
TTTCCCGTCA CTGACGCTGG TCCCATTCTT GCCTCGCTCC TCTTCGGTTT TGGCACCTGC
ATGGGCACCG TCGCTCCACC GATGATGACC GTCAAAGAAT TCGGTAAGAA AGATTTGGGA
ACTATTACCG GTATTGTAAC GGCCTTCGAA ATGTTTGGTG CCGCGCTTGG TGCCGTAGCT
TCAGGTTTGC TGTTTGATGC GTACCTTTCG TTTGTGCCTG CCTGGATTAT GGTTATGGTG
GCAACCGTTG CTATGGGTAC GTTTCTGCTT GTTTCTATTC CTGCTGCAAA AAGCTTGGCG
GAGAAACGTA TCGCCGCCGG TGCTCCCCTG CTTGACGCAG AAGGAAATGA AATCGCCCAT
TAG
 
Protein sequence
MTTDGEKPPV DREHAAHTSK TPENNAVFTT EKDAVFVATD NSTFATTDNN TVATTTNGNR 
KPFYGWGIVA AGFLLMATCY TVFVNCIPLF QTHIVRDLGI TVGQFNTGVS LCTVVAVFAS
LAIGKLIDIW DVRILGTFTV LCAFVVLIGF SLATQLWHLY VLCILAGMIV VAGTRLLSSV
IIANWFTLKR GLAVSIALSG SGVGGVVLSP ITSMLITGFG WRSAFGTLAF VCLVLGLPLV
LVFFRNHPSD KGLLPYGAGQ VEQTHVDRSP DKPVSVALGW KVLKKSRAFW LMTAGFVMMG
IDNGAIITNA VSNMTFVELH GTTVVTGGHD TLWAGNVWAF YLACVIVFKV LLGAIYDRWG
MRTGTLIGTA TSLAAAVALC FPVTDAGPIL ASLLFGFGTC MGTVAPPMMT VKEFGKKDLG
TITGIVTAFE MFGAALGAVA SGLLFDAYLS FVPAWIMVMV ATVAMGTFLL VSIPAAKSLA
EKRIAAGAPL LDAEGNEIAH