Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccur_08820 |
Symbol | |
ID | 8375090 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cryptobacterium curtum DSM 15641 |
Kingdom | Bacteria |
Replicon accession | NC_013170 |
Strand | - |
Start bp | 1011337 |
End bp | 1012878 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644993804 |
Product | 2-isopropylmalate synthase |
Protein accession | YP_003151265 |
Protein GI | 256827306 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | [TIGR00973] 2-isopropylmalate synthase, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.834737 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 103 |
Fosmid unclonability p-value | 0.224483 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACACGCA AGATAGACAT TCTTGATACG ACACTGCGTG ATGGCGAACA ATCGCCTGGC GCTTCTATGA ATACGGAAGA AAAGCTTTCC GTTACTCGTC AACTCGTGCG CTTAAACGTT GATGCAATTG AGGCAGGATT TCCCGTTTCG TCGCCCGGAG ACTTCGAAAG CGTTCAACGC ATTGCTGAAG CGGTTGGCGA TAGCGCGGTG GTTGTTGCTC TTACGCGCGC GGTTGAAAAA GACATTGATG CTGCTGCCGC TGCTCTTGCT ACGGCAGCTC GCCCGCGCAT TCATACGGGG TTGGGTGTAT CACCGAGTCA CTTGCGTGAT AAGCTGCGTA TTTCCGAAGA TGAATGTGTC GAGCGAGCCG TGCATTGCGT TCGCTATGCG CGCAATCTAT GCGATGACGT TCAATTTTAT GCTGAGGATG CGGGGCGTGC TGATTATGCG TTTCTCGCAC GGGTGATTCA GGCCGTGATA TTCGCGGGTG CGACTGTGGT GAACATTCCT GATACTACAG GGTATTCGCT ACCTGATGAA TTCGGTCGGC GCATTCAGTA CTTGAAAGAG CATGTTGATG GCATTGATAC CGTCACACTT TCGGTGCATT GCCACAACGA TTTAGGCATG GCGACAGCGC TTTCTTTGGC AGGTGTTGCC GCTGGTGCAA CGCAGGTTGA ATGCACCATT AACGGTCTTG GTGAGCGTGC GGGTAATACG GCCATGGAAG AAGTGGTTAT GGGAATCCGC ATGCACGAAG ACGAACTGGG TGCGCATACC GACATCAACA CCCGAGAATT CACGCGCGCT TCGCATTTGG TGTCATCTAT CACGGGTATG GGCGTGCAGG CGAATAAGGC TATCGTCGGT GCGAATGCAT TTGCGCATTC ATCAGGCATT CACCAAGATG GCGTTCTCAA AAAGCGCGAC ACCTATGAAA TTATCAGCCC GGAAGAAGTC GGTGCCGATA AAAGCCGGAT TGTGCTTTCA GCCCGCAGTG GGCATGCTGC TTTGAAGCAT CGTCTTGAGC ATTTAGGGTA TACGTTTGAT CCGCCGGCGC TTGATGCACT GTATGAGCGG TTTCTTGAGG TGGCCGATCG TAAGAAAGAA GTCTACGACG AAGACCTTGA AAGCCTTGTG GCCGATCAGG CGCGTGTGAC TGATGCTATC TATACGCTTG AGGCAGTGCA GGTAAGCTGC GGTTTTCCTC TCACACCAAC AGCTACGTTG ACACTGCGCG ACGATCAGGG GGCCACACAA ACGGTATGCG CTTTTGGTAC GGGTCCTATT GATGCGGCGT TTAAAGCGGT CGATGAGATT ATGAATGTGC AGGGTGAGCT GCAGGAATTT AGTGTCAATG CGGTTACACA TGGTATTGAC GCACTTGGCG AAGTGACAGT GCGGGTGCGC TGTGCCGAAG GAGATGTCTT TATCGGACGC GCTTCGGATG GCGATATCAT CGTGTCATCC ACCAAAGCCT ACCTGCATGC TTTGAACCGC ATGATATCTC GTGACCGGGC ACGTAAGGCA AAACGCGCCT GA
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Protein sequence | MTRKIDILDT TLRDGEQSPG ASMNTEEKLS VTRQLVRLNV DAIEAGFPVS SPGDFESVQR IAEAVGDSAV VVALTRAVEK DIDAAAAALA TAARPRIHTG LGVSPSHLRD KLRISEDECV ERAVHCVRYA RNLCDDVQFY AEDAGRADYA FLARVIQAVI FAGATVVNIP DTTGYSLPDE FGRRIQYLKE HVDGIDTVTL SVHCHNDLGM ATALSLAGVA AGATQVECTI NGLGERAGNT AMEEVVMGIR MHEDELGAHT DINTREFTRA SHLVSSITGM GVQANKAIVG ANAFAHSSGI HQDGVLKKRD TYEIISPEEV GADKSRIVLS ARSGHAALKH RLEHLGYTFD PPALDALYER FLEVADRKKE VYDEDLESLV ADQARVTDAI YTLEAVQVSC GFPLTPTATL TLRDDQGATQ TVCAFGTGPI DAAFKAVDEI MNVQGELQEF SVNAVTHGID ALGEVTVRVR CAEGDVFIGR ASDGDIIVSS TKAYLHALNR MISRDRARKA KRA
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