Gene Ccur_08820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcur_08820 
Symbol 
ID8375090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptobacterium curtum DSM 15641 
KingdomBacteria 
Replicon accessionNC_013170 
Strand
Start bp1011337 
End bp1012878 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content53% 
IMG OID644993804 
Product2-isopropylmalate synthase 
Protein accessionYP_003151265 
Protein GI256827306 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID[TIGR00973] 2-isopropylmalate synthase, bacterial type 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.834737 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones103 
Fosmid unclonability p-value0.224483 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACACGCA AGATAGACAT TCTTGATACG ACACTGCGTG ATGGCGAACA ATCGCCTGGC 
GCTTCTATGA ATACGGAAGA AAAGCTTTCC GTTACTCGTC AACTCGTGCG CTTAAACGTT
GATGCAATTG AGGCAGGATT TCCCGTTTCG TCGCCCGGAG ACTTCGAAAG CGTTCAACGC
ATTGCTGAAG CGGTTGGCGA TAGCGCGGTG GTTGTTGCTC TTACGCGCGC GGTTGAAAAA
GACATTGATG CTGCTGCCGC TGCTCTTGCT ACGGCAGCTC GCCCGCGCAT TCATACGGGG
TTGGGTGTAT CACCGAGTCA CTTGCGTGAT AAGCTGCGTA TTTCCGAAGA TGAATGTGTC
GAGCGAGCCG TGCATTGCGT TCGCTATGCG CGCAATCTAT GCGATGACGT TCAATTTTAT
GCTGAGGATG CGGGGCGTGC TGATTATGCG TTTCTCGCAC GGGTGATTCA GGCCGTGATA
TTCGCGGGTG CGACTGTGGT GAACATTCCT GATACTACAG GGTATTCGCT ACCTGATGAA
TTCGGTCGGC GCATTCAGTA CTTGAAAGAG CATGTTGATG GCATTGATAC CGTCACACTT
TCGGTGCATT GCCACAACGA TTTAGGCATG GCGACAGCGC TTTCTTTGGC AGGTGTTGCC
GCTGGTGCAA CGCAGGTTGA ATGCACCATT AACGGTCTTG GTGAGCGTGC GGGTAATACG
GCCATGGAAG AAGTGGTTAT GGGAATCCGC ATGCACGAAG ACGAACTGGG TGCGCATACC
GACATCAACA CCCGAGAATT CACGCGCGCT TCGCATTTGG TGTCATCTAT CACGGGTATG
GGCGTGCAGG CGAATAAGGC TATCGTCGGT GCGAATGCAT TTGCGCATTC ATCAGGCATT
CACCAAGATG GCGTTCTCAA AAAGCGCGAC ACCTATGAAA TTATCAGCCC GGAAGAAGTC
GGTGCCGATA AAAGCCGGAT TGTGCTTTCA GCCCGCAGTG GGCATGCTGC TTTGAAGCAT
CGTCTTGAGC ATTTAGGGTA TACGTTTGAT CCGCCGGCGC TTGATGCACT GTATGAGCGG
TTTCTTGAGG TGGCCGATCG TAAGAAAGAA GTCTACGACG AAGACCTTGA AAGCCTTGTG
GCCGATCAGG CGCGTGTGAC TGATGCTATC TATACGCTTG AGGCAGTGCA GGTAAGCTGC
GGTTTTCCTC TCACACCAAC AGCTACGTTG ACACTGCGCG ACGATCAGGG GGCCACACAA
ACGGTATGCG CTTTTGGTAC GGGTCCTATT GATGCGGCGT TTAAAGCGGT CGATGAGATT
ATGAATGTGC AGGGTGAGCT GCAGGAATTT AGTGTCAATG CGGTTACACA TGGTATTGAC
GCACTTGGCG AAGTGACAGT GCGGGTGCGC TGTGCCGAAG GAGATGTCTT TATCGGACGC
GCTTCGGATG GCGATATCAT CGTGTCATCC ACCAAAGCCT ACCTGCATGC TTTGAACCGC
ATGATATCTC GTGACCGGGC ACGTAAGGCA AAACGCGCCT GA
 
Protein sequence
MTRKIDILDT TLRDGEQSPG ASMNTEEKLS VTRQLVRLNV DAIEAGFPVS SPGDFESVQR 
IAEAVGDSAV VVALTRAVEK DIDAAAAALA TAARPRIHTG LGVSPSHLRD KLRISEDECV
ERAVHCVRYA RNLCDDVQFY AEDAGRADYA FLARVIQAVI FAGATVVNIP DTTGYSLPDE
FGRRIQYLKE HVDGIDTVTL SVHCHNDLGM ATALSLAGVA AGATQVECTI NGLGERAGNT
AMEEVVMGIR MHEDELGAHT DINTREFTRA SHLVSSITGM GVQANKAIVG ANAFAHSSGI
HQDGVLKKRD TYEIISPEEV GADKSRIVLS ARSGHAALKH RLEHLGYTFD PPALDALYER
FLEVADRKKE VYDEDLESLV ADQARVTDAI YTLEAVQVSC GFPLTPTATL TLRDDQGATQ
TVCAFGTGPI DAAFKAVDEI MNVQGELQEF SVNAVTHGID ALGEVTVRVR CAEGDVFIGR
ASDGDIIVSS TKAYLHALNR MISRDRARKA KRA