Gene Ccur_05680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcur_05680 
Symbol 
ID8374776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptobacterium curtum DSM 15641 
KingdomBacteria 
Replicon accessionNC_013170 
Strand
Start bp667967 
End bp668806 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content50% 
IMG OID644993491 
Productribonuclease III 
Protein accessionYP_003150968 
Protein GI256827009 
COG category[K] Transcription 
COG ID[COG0571] dsRNA-specific ribonuclease 
TIGRFAM ID[TIGR02191] ribonuclease III, bacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0033442 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones109 
Fosmid unclonability p-value0.77116 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTACGC ACGATGAACA GCGCGAAAAA CTCGATCGCG CTCAAGAGGT TTTAGGGTAT 
CGCTTTTCAG ATGAGCACTT TTTGTTATCG GCTATTACGC ATCCCTCTGC AGTTGAGGGC
ATGCCGGTTA AGTTTTCCTA TGAACGGCTT GAATTTTTAG GCGATAGCAT TTTAGGGGCT
GTCGTTGCTG ATGCCGCATT TCATCGGTTT CCCGATCTTG ACGAAGGCGG CCTGACACGC
ATTAAGGTGT CTCTCGTGGC TGGATCTTCG TTATCCCAGG TAGCTAATGA ATTGGGATTT
GCCGATTTTA TTATCTTTGG CCAGTCTGAA GCAGGTACTG GTCGTCGTGG TCTGCATTCA
GCACTCGAAA ATGTCTACGA GGCTGTGGTG GCCGCTTTGT ATTTGGATGG CGGCATGGAA
GTTGCTCGCT CCTTTATTGT TCAAACCCTG CTTGGTTACA TGAGCATTGA CATGGCGCGC
GAACCGGAAA ATCCTAAGAG TGCGCTGCAA GAAAAACTGC AGGAGGATGG CATTACTCCT
ACCTATAAAC TTATTGAAAC GCAGGGGCCA CCGCATGATC GTACATTTGT TGCAGCGGTA
TATGCGGGCC TGCAAGCGCT TGCGCGAGGG GTTGGGCGCA CGAAGAAAGA AGCGGAGAGC
AAGGCGGCTC AGACAGCGCT TTCCCATCTG CCCGACGAAA AGCATAAGCG GCATAAAGAT
AAGGGTAAAG ATAAAGCTGA ACATCGCAAG AAGGGTGCTA CGAGTCATTC TCAAGATAAC
GATACGGGCG AAAAGCCGAT ACCGGATACG GTGGCATCGA ACACGGCAGG GCGGGAGTAA
 
Protein sequence
MVTHDEQREK LDRAQEVLGY RFSDEHFLLS AITHPSAVEG MPVKFSYERL EFLGDSILGA 
VVADAAFHRF PDLDEGGLTR IKVSLVAGSS LSQVANELGF ADFIIFGQSE AGTGRRGLHS
ALENVYEAVV AALYLDGGME VARSFIVQTL LGYMSIDMAR EPENPKSALQ EKLQEDGITP
TYKLIETQGP PHDRTFVAAV YAGLQALARG VGRTKKEAES KAAQTALSHL PDEKHKRHKD
KGKDKAEHRK KGATSHSQDN DTGEKPIPDT VASNTAGRE