Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccur_05160 |
Symbol | |
ID | 8374724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cryptobacterium curtum DSM 15641 |
Kingdom | Bacteria |
Replicon accession | NC_013170 |
Strand | + |
Start bp | 609599 |
End bp | 610705 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644993440 |
Product | 3-dehydroquinate synthase |
Protein accession | YP_003150919 |
Protein GI | 256826960 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0337] 3-dehydroquinate synthetase |
TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 141 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGAACG TCAAGGTGGT CGTTAATCTT ACCAACGCGC CATCCTACGA TGTACGCATC GGAGAGGGGA TATCTTCTTC GCTTGGTGAG CGTATACGCT CGCTCGTGCC CCAGGCAAGT CGTGCCGTTA TCATCAGTGA TTCAAACGTG GCACCGCTCT ATGTACAGCC TATTCGTGCC AGTTTGAAAG AGGCGGCTTT GCGTCCGCTT GATATTGTTG TGCCAGCCGG TGAACCGTCA AAGAGTATCG AATGTCTCGG CGAGATATGG CGGGCGCTTG CTTCTAAGCA GGTTGATCGC GATTGTGTAG TGGTTGCACT CGGCGGTGGT GTCGTGGGTG ACCTGGCAGG CTTTGCTGCG GCAACGTATC TTCGTGGTGT GTCGTTTGTA CAGGTACCAA CGACCCTTTT GGCTATGGTT GATTCTTCAG TGGGAGGTAA AACCGGTATT GACTTACCCG AAGGAAAGAA TCTTGCCGGA TCCTTTTTGC AGCCACGGTA TGTCTGCGCC GATCTTGATA CCCTTTCAAC ACTCGACGGC CGCGAATGGA CATGCGGCCT TGGCGAAATT GCTAAATCGG CTGTTATTGA TTCTGACGAA TTTTTCTTCT GGTTGGTTGA GCATGCCACT GATATCGCCC AGCGCAAGTC AGATATCGTG CAAGAGGCCA TTATGCGCTG TGTGGTCTTT AAGGCTAACG TTGTCGCAGA TGACGAGTTT GAACGTTCAG GGCGCCGTGC TTGTTTGAAC TATGGTCATA CACTTGGTCA TGCTATCGAA ACACTGGCGG GTCTTGGCAC CTATTCTCAC GGAGCATGCG TTGCGGAGGG AATGCGGTTT GCTGCCCGAC TTGGTGCGGC GCTTGCGGGT GCTTCGCTTG ATTTTGTGCA CGAACAAGAC AAGTTGCTTG ATACGTTAGG GTTGGTGCCG CTTGATTTTT CAGCAGCGGT AGACGACATC ATCGACGTTA TGAAAAACGA CAAGAAATCG CGGGCGGGCA AGATTAATTT TATTCTGCCA CGCGATGTTG GCTCGTGGAC GTTGCAGACA GTTGAAGAAG ATGTGCTGCG CGAGCATCTT GATGCATGGG CCCGTTCAAA GGGCTGA
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Protein sequence | MPNVKVVVNL TNAPSYDVRI GEGISSSLGE RIRSLVPQAS RAVIISDSNV APLYVQPIRA SLKEAALRPL DIVVPAGEPS KSIECLGEIW RALASKQVDR DCVVVALGGG VVGDLAGFAA ATYLRGVSFV QVPTTLLAMV DSSVGGKTGI DLPEGKNLAG SFLQPRYVCA DLDTLSTLDG REWTCGLGEI AKSAVIDSDE FFFWLVEHAT DIAQRKSDIV QEAIMRCVVF KANVVADDEF ERSGRRACLN YGHTLGHAIE TLAGLGTYSH GACVAEGMRF AARLGAALAG ASLDFVHEQD KLLDTLGLVP LDFSAAVDDI IDVMKNDKKS RAGKINFILP RDVGSWTLQT VEEDVLREHL DAWARSKG
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