Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ccur_05120 |
Symbol | |
ID | 8374720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cryptobacterium curtum DSM 15641 |
Kingdom | Bacteria |
Replicon accession | NC_013170 |
Strand | + |
Start bp | 605458 |
End bp | 606669 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 644993436 |
Product | conserved hypothetical protein TIGR00247 |
Protein accession | YP_003150915 |
Protein GI | 256826956 |
COG category | [R] General function prediction only |
COG ID | [COG1559] Predicted periplasmic solute-binding protein |
TIGRFAM ID | [TIGR00247] conserved hypothetical protein, YceG family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.924204 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 140 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCCTGC ATCGCCAGGT TACGTATTCA TCTCGTCCCA ATCGTGCTGC TCGTATGGCA CACGCTAAAG GCGAGCGCCA GTTCCGCACC TATGACACGT CGCTGATTCA GCCACGCCAT TCGCGCGGAC GACTGATTGT TGTGGCTCTT GCGGCGCTTC TATTGGTCGC CCTTATTGGT TTTGGTATTC ATTCCTGCCT GAAGGCACCT GAAGTTGAGC TTATTGACGA GTCCACATCG GTTACCTTCA CGATTCCTGA AGGAGCAAGT ACCGCCGATA TCGCGCGTAT CCTGCAGGAG AACCGCTTGG TTGCGCGCGC TTCTGATTTT TCGGACGCGG TCAAGGCACG GGGTGTTGCT TCTTCACTCA AGCCCGGTAC CTACACACTG ACGGGCGGCC TTGATGTGTC TGATATTGTC GATACGCTTG TTTCAGGGCC GAATTCATCG ACGCTTACCA TTCCTGAAGG CTATACGCTC GCCCGTACAG CAGCAGCTGT TGAAACGGCA ACCGATGGAC GTATCAGTGC TGCTGAATTT ACTGCAGCCG CAAGTGACGC CACGGCGTTT TCCGATCAGT TTCCCTTTGT GGCTGAGGCC TACAATGGGT CGCTTGAAGG ATTTTTGTTT CCTAAGACCT ATGAAGTGCT TATAAGCGAT ACGGCCGATT CGCTTATTCG TAAGATGCTT TCACAATACC AATCCGAAAC GGCGACTCTT GACTATTCAT ATGCGTCTGC GGCGGGTCTT TCTTCCTACG ATGTGCTGAA GTTGGCAAGC ATGGTGGAAC GCGAGGCCGA TGATACCAAT CGTTCGCGTG TTGCCGGGGT ATTCTACAAT CGCCTTGCGG CAAATATGGC CCTGCAGAGT GATGCAACCA TTGCCTATCT TGTTGGCGGC GATCCAACAC ACGACGATTT GTCGATTGCA AGCCCTTACA ACACCTATTT GAATAAGGGG CTGCCAGCTG GCCCTATTTG TTCACCTGGT CTTGATGCAC TTTCGGCGGC GTGTCAGCCT GAACAGAACG ATTACCTGTA TTTTTACTTC GTGAAGAATA GCGATGGTTC GATGAGCTAT TTCTTTAGTC GCACGTACGA AGAACATCAA CAGGCAATTG CTCAAACGCA GGGCAGCGAT AGCGATCAGA CGCAAGAAGA GAGCGATTCC AGTGGGGAAG CGCGTGATTC TTCCTCATCT GATGAATCAT AG
|
Protein sequence | MALHRQVTYS SRPNRAARMA HAKGERQFRT YDTSLIQPRH SRGRLIVVAL AALLLVALIG FGIHSCLKAP EVELIDESTS VTFTIPEGAS TADIARILQE NRLVARASDF SDAVKARGVA SSLKPGTYTL TGGLDVSDIV DTLVSGPNSS TLTIPEGYTL ARTAAAVETA TDGRISAAEF TAAASDATAF SDQFPFVAEA YNGSLEGFLF PKTYEVLISD TADSLIRKML SQYQSETATL DYSYASAAGL SSYDVLKLAS MVEREADDTN RSRVAGVFYN RLAANMALQS DATIAYLVGG DPTHDDLSIA SPYNTYLNKG LPAGPICSPG LDALSAACQP EQNDYLYFYF VKNSDGSMSY FFSRTYEEHQ QAIAQTQGSD SDQTQEESDS SGEARDSSSS DES
|
| |