Gene Ccur_04390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcur_04390 
Symbol 
ID8374647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCryptobacterium curtum DSM 15641 
KingdomBacteria 
Replicon accessionNC_013170 
Strand
Start bp514511 
End bp515638 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content55% 
IMG OID644993363 
Product3-isopropylmalate dehydrogenase 
Protein accessionYP_003150844 
Protein GI256826885 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR00169] 3-isopropylmalate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones111 
Fosmid unclonability p-value0.930022 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGGA CAAGTTATAC GATCTGTCTG CTTCCAGGTG ATGGCATTGG CGTCGAGATT 
ATGGATGCAG CTGCCGGTGT CCTTGATGCG ATTTCAAAGG CATCTGGCAT ACGCTTTGTG
TTCGATCGTC AGCTGTTGGG AGGCTGCGCT ATTGATGAGG TGGGCGACCC GTATCCACCT
GCCACGCACC GTGCTGCGCA TGAAGCCGAT GCCGTTTTGC TGGGTGCAGT CGGTGGCCCC
AAATGGGATT CCACTGATCC CTGTGCACCG CGGCCTGAAG CAGGTTTGCT TGCTATTCGC
AAAGACCTTG GTCTGTTCGC AAATATGCGT CCTGTACGAG TGCAACCTGA TCTTGTCGGA
TCTTCCCCCT TACGTCCTGA GGTCATCCAA GGAGTTGATC TGATCATCGT GCGTGAACTG
ACGGGGGGCT TGTACTTTGG AGCGCGTGAG CGCACGTACG ACGAAGATGG GGCCGGTGCT
AACGGTGAGC CAGGCCAGCA TGCAATCGAC ACGCTTGACT ATCGGGAATA TGAAATTGAG
CGTATTGTGC GTCGCGCATT TGAGGTAGCG CTTCGCCGAC ATCGGCGTCT TGTGTCAGTT
GATAAAGCGA ATGTACTTGA GACAAGTCGC CTTTGGCGTG AAGTTGTCCA CCGCATTGCT
CGCGAGTATC CGCAGGTAGA ATGCAGCGAC ATGCTCGTTG ATAATGCAGC TATGCAGCTG
ATTCGCGATC CACGTCAGTT TGACGTTATC GTGACGGAAA ATACGTTTGG CGATATTCTT
TCCGATGAAG CAAGCATGCT TTCTGGGTCG CTTGGCCTGC TTGCCAGTGC CAGTTTGGGT
GAGCGTGCCG CTCTGTTTGA GCCCAGCCAC GGTAGTGCGC CTGATATTGC GGGGCAAGAC
ATTGCCAATC CCATCGCTCA GGTACTTTCG GTGGAAATGA TGTTGCGCTA TGCCTTTGGA
TTGCAGCGCG AAGCGGCTGC TGTCGCTTCG GCGGTTGATA GCGTGCTGGC TGCTGGCTGG
CGCACGCGTG ATCTCGCAGA AGCCGATACC CCTGATGACC GAATTGTTGG TTGCGCGCAA
ATGGGTAGTC TTATTGCTCA TGTGACGCAT CAGGCGTTAG TCGAATAG
 
Protein sequence
MARTSYTICL LPGDGIGVEI MDAAAGVLDA ISKASGIRFV FDRQLLGGCA IDEVGDPYPP 
ATHRAAHEAD AVLLGAVGGP KWDSTDPCAP RPEAGLLAIR KDLGLFANMR PVRVQPDLVG
SSPLRPEVIQ GVDLIIVREL TGGLYFGARE RTYDEDGAGA NGEPGQHAID TLDYREYEIE
RIVRRAFEVA LRRHRRLVSV DKANVLETSR LWREVVHRIA REYPQVECSD MLVDNAAMQL
IRDPRQFDVI VTENTFGDIL SDEASMLSGS LGLLASASLG ERAALFEPSH GSAPDIAGQD
IANPIAQVLS VEMMLRYAFG LQREAAAVAS AVDSVLAAGW RTRDLAEADT PDDRIVGCAQ
MGSLIAHVTH QALVE