Gene Ksed_26070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_26070 
Symbol 
ID8374110 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2675296 
End bp2675874 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content71% 
IMG OID644992827 
Productpeptide deformylase 
Protein accessionYP_003150327 
Protein GI256826367 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0242] N-formylmethionyl-tRNA deformylase 
TIGRFAM ID[TIGR00079] peptide deformylase 


Plasmid Coverage information

Num covering plasmid clones75 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTCC GCCCGATCAC CATCATCGGA CACAAGGCGC TGCACCAGCC CACCAAGAAG 
GTGCGCGAGG TGACCGACGA AATCCGCACC CTGGTGGCCG ACATGTTCGA CACCATGGAG
GCCGCCGAGG GCGTGGGCCT GGCCGCCAAC CAGGTGGGCG TGCGCTGGCG GATCTTCGTC
TACGACTGCA CCCACGACCC CGAGGCCGGC CCCGACGCCC GCGGCGTGGT GGTCAACCCG
GTGCTCGAGA AGGAGCACGT CTCCCCGCTG TCGGCGGACC CGGAGGCCGA CCACGAGGGC
TGCCTGTCCG TGCCCGGCGA GAGCTTCCCG ACCGCCCGCT CGGACTGGGC GCGGGTGACC
GGCACCGACC TGGACGGCAA TGCCATCAGC GTGGAGGGAA CGGGTCTGCT GGGCCGCTGC
CTGCAGCACG AGACCGACCA CCTGGACGGC CACCTCTACG TCGAGCGCCT GTCCCCGGAG
GACAAGCGCC GTGCGCGCGA CGCCATCAAG GAGCGCGGCT GGGAGGACGA GCGGATCCTC
AAGTGGGACC CGACCACCCA GAAGGCCGAG AAGGTCTGA
 
Protein sequence
MAVRPITIIG HKALHQPTKK VREVTDEIRT LVADMFDTME AAEGVGLAAN QVGVRWRIFV 
YDCTHDPEAG PDARGVVVNP VLEKEHVSPL SADPEADHEG CLSVPGESFP TARSDWARVT
GTDLDGNAIS VEGTGLLGRC LQHETDHLDG HLYVERLSPE DKRRARDAIK ERGWEDERIL
KWDPTTQKAE KV