Gene Ksed_25280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_25280 
Symbol 
ID8374031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2604747 
End bp2605382 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content77% 
IMG OID644992753 
ProductFlp pilus assembly protein TadC 
Protein accessionYP_003150256 
Protein GI256826296 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2064] Flp pilus assembly protein TadC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones78 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCCA CCGTGTGCGC CATGGCCCTC ACGGCCTGCG CGATCTGGCT GGTGTGGCCC 
GCCCCCACGG CGGCGGGAGG TGAGCGCCTG GGCCGCGGTG ACAGGGCGGG GTCCACGGCG
TCCGGCGCCG GAGCGCCTGC GCACCCGCGG CGTCGCCTGC TGGGGCTGCT GCCGCCGCGG
GCGCCGAAGC CGCCCACGGC GGACGTCGAC GACCTGGCCG CGGTGCTCGA CCTGATGGCG
CTCGCCCTGG ACTCCGGGTG CGCCGTCACC GACGCCCTCG AGCTGGTGGC CGACGAGGTC
CCCGAGCCCC TGGCCGGGCA CCTCCGCCAG GTGGTGGCCG CCCGCCGGTG GGGAGTCACC
GGTGCCGACG CCTGGAAGGG ACTGCCCTCC CAGTGGGGAC CGGTCGCCCA GGCCCTGACG
CTGGCGCAGC TGGCCGGCGC CCCTCCGGCG GAGACCATCC GCCGCGCCGC GGCCGACCTG
CGGCGCGACC GGCGGGCCGC CCTGGAGCGT GCGGCCGCCC GCCTCCCGGT GTTCCTGGTG
ATCCCACTGG GCACCGTCTT CATGCCTGCC TTCGTCCTCA TCGCGGTGGT CCCGCTGGTG
GTGGCGCTGG CAACACAGAC CCTGGGTCAC GCCTGA
 
Protein sequence
MTATVCAMAL TACAIWLVWP APTAAGGERL GRGDRAGSTA SGAGAPAHPR RRLLGLLPPR 
APKPPTADVD DLAAVLDLMA LALDSGCAVT DALELVADEV PEPLAGHLRQ VVAARRWGVT
GADAWKGLPS QWGPVAQALT LAQLAGAPPA ETIRRAAADL RRDRRAALER AAARLPVFLV
IPLGTVFMPA FVLIAVVPLV VALATQTLGH A