| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_25200 |
|---|
| Symbol | |
|---|
| ID | 8374023 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | + |
|---|
| Start bp | 2597801 |
|---|
| End bp | 2598754 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644992745 |
|---|
| Product | ABC-type multidrug transport system, ATPase component |
|---|
| Protein accession | YP_003150248 |
|---|
| Protein GI | 256826288 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01288] ATP-binding ABC transporter family nodulation protein NodI |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 86 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCTCCC CCTCGTCCCC CGCCTCCTCA TCGGCCCCCG TCATCCGCGC CCGCGGGCTC
ACCAAGACCT ACGGCGACTT CGCGGCCGTC GACGGCATCG ACTTCGACAT CGCCCCGGGT
GAGTCCTTCG GCCTGCTCGG CCCCAACGGT GCCGGCAAGT CCACGACGAT GCGGATGATC
GGCGGCACCC TGAACCGCAC CAGCGGCACG ATGGAGGTGG CCGGGCTCGA CCCCGACACC
CACGGCCCGG AGGTGCGCGC CACCTTGGGC GTGGTGCCGC AGCAGGACAA CCTCGACACC
GAGCTCACCG CCCGCGACAA CCTGATGGTC TACGGCCGCT ACTTCGGGCT GCCGTGGAGC
TACCTGCGCC CCAAGGCCGA CGAGCTGCTC GAGTTCGCCC AGCTCACCGA GAAGGCCAAG
AGCAAGGTCG ACGACCTCTC CGGCGGCATG AAGCGGCGCC TCACCATCGC GCGTTCGCTG
GTGAACGAGC CGAAGGTGTT GTTGCTCGAC GAGCCGACCA CCGGTCTGGA CCCGCAGGCC
CGCCACGTGC TGTGGGACCG GCTGTTCCGC CTCAAGGAGG TGGGCGTCAC CCTGGTGGTC
ACCACCCACT TCATGGACGA GGCCGAGCAG CTGTGCGACC GCCTGATCGT GGTGGACCAC
GGCACCATCA AGGCCGAGGG CTCACCCCGC GAGCTGATCC GCACCTACTC CACCCGCGAG
GTGCTCGAGC TGCGCTTCGG CGCCGACCGC AACGCCGAGG TGGTGGGCCA GCTGGAGTCG
CTCGGCGAGC GCACCGAGGT GCTGCCCGAC CGCATCCTGC TCTACGCCGA CGACGCCGAG
GCCGCCCTCG ATGCGGTGAC CTCCCGCGGG CTTCAGCCCG TCACGTCGCT GGTGCGTCGC
TCCTCGCTGG AGGACGTGTT CCTCCACCTC ACCGGGCGGA CCCTCGTTGA CTGA
|
|---|
| Protein sequence | MSSPSSPASS SAPVIRARGL TKTYGDFAAV DGIDFDIAPG ESFGLLGPNG AGKSTTMRMI
GGTLNRTSGT MEVAGLDPDT HGPEVRATLG VVPQQDNLDT ELTARDNLMV YGRYFGLPWS
YLRPKADELL EFAQLTEKAK SKVDDLSGGM KRRLTIARSL VNEPKVLLLD EPTTGLDPQA
RHVLWDRLFR LKEVGVTLVV TTHFMDEAEQ LCDRLIVVDH GTIKAEGSPR ELIRTYSTRE
VLELRFGADR NAEVVGQLES LGERTEVLPD RILLYADDAE AALDAVTSRG LQPVTSLVRR
SSLEDVFLHL TGRTLVD
|
|---|
| |