Gene Ksed_24950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_24950 
Symbol 
ID8373998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2575295 
End bp2576476 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content75% 
IMG OID644992721 
Productcystathionine gamma-synthase 
Protein accessionYP_003150224 
Protein GI256826264 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones87 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACAC CCGGACCGCT CGACCCGCGC ACCGCAGCCG TCCACGCCGG ACGCCACGAC 
CTGACCTCGA TGGGGGTGCA CGCCGCCCCC ATCGACCTCT CCAGCACGTC GCCCCTGCCG
GAGGTCGAGG CCGGCGGGGA GGCCTACGAG CAGCTCGCGG GCGGCGGGCG GCCGGGTGAG
GGGCAGTCGT TCGTCTACCA GCGGCTGTGG AACCCCACCG TCGCGCGTTT CGAGGACGCC
CTGGCCGAGC TCGAGCACAC CGACGAGGCG GTGGCGTTCG CCTCGGGGAT GGCGGCCGTG
GCGGCATCCT TGCTGGCCTG CGTCGCGGCG GGCACACCCC ACGTGGTGGC GGTGCGCCCC
CTGTACGGCG GCACCGACCA CCTGTTGGGC ACCGGGCTGC TGGGCACCGA GGTGAGCTGG
GTGGAGGCCG ACGGCATCGC CGCCGCGATC ACCGAGCGCA CGGGTCTGGT GGTGGTCGAG
ACGCCGGCCA ACCCGACCCT CGAGCTGGTG GACCTCGATG CGGTGGTGGC TGCGGCCGGG
GACGTGCCGG TGCTGGTGGA CAACACCTTC GCCACCCCGA TTCTGCAGAA CCCGGCCGAC
CACGGGGTGG CGTTGGTGCT GCACTCGCTG ACCAAGGCCA TCGGCGGGCA CGGCGACCTG
CTGGGCGGCG CGATCGCGTG CACCTCCGAG TGGGCGGTGC GGTTGCGCCA GGTCCGTGCC
GTGACCGGTG GGCTGCTGGC CCCGCAGGTG GCCTACACCG CCCACCGTGG CCTGCAGACC
CTGGCCGTGC GCGTCGAGGC CGCCACCCGC ACCGCCGGTG AGGTGGCCCG CTGGTTGGCC
GATCACCCGG AGGTGGCCGC GGTGCACTAC CCCGGTCTGG CCGGCGGCGC CGATGCGGAG
CTGGTCGCCC GCCAGATGCG GGGTCCGGGC TCGATGCTGG CCATCCGCCT GGCCGGGGGC
TATGAGGCAG CCTCCACGGT GGCGCAGTCG TGCCGGATGA TCGTGCACGC GGTGAGCCTG
GGCGGCGTGG ACACGCTCAT CCAGCACCCG GCGGCCCTGA CCCACCGCCC CGTGCCCGCC
GAGGCCCGAC CGGCCGCGGA CGTGCTGCGG CTGTCGGTCG GGCTCGAGTC GGCCGAGGCG
ATCATCGCCG ACCTCGAGCA GGCGCTGGCT CAGCTGGCCT GA
 
Protein sequence
MSTPGPLDPR TAAVHAGRHD LTSMGVHAAP IDLSSTSPLP EVEAGGEAYE QLAGGGRPGE 
GQSFVYQRLW NPTVARFEDA LAELEHTDEA VAFASGMAAV AASLLACVAA GTPHVVAVRP
LYGGTDHLLG TGLLGTEVSW VEADGIAAAI TERTGLVVVE TPANPTLELV DLDAVVAAAG
DVPVLVDNTF ATPILQNPAD HGVALVLHSL TKAIGGHGDL LGGAIACTSE WAVRLRQVRA
VTGGLLAPQV AYTAHRGLQT LAVRVEAATR TAGEVARWLA DHPEVAAVHY PGLAGGADAE
LVARQMRGPG SMLAIRLAGG YEAASTVAQS CRMIVHAVSL GGVDTLIQHP AALTHRPVPA
EARPAADVLR LSVGLESAEA IIADLEQALA QLA