Gene Ksed_24040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_24040 
Symbol 
ID8373907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2487107 
End bp2488153 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content76% 
IMG OID644992632 
Productuncharacterized MccF-like protein (microcin C7 resistance) 
Protein accessionYP_003150136 
Protein GI256826176 
COG category[V] Defense mechanisms 
COG ID[COG1619] Uncharacterized proteins, homologs of microcin C7 resistance protein MccF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones53 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCTC TGCTGCACCC TCCCAAGGCC CGCCCCGGCG ACCGGGTCGC CGTCCTCTCC 
CCCTCCTTCG CGGCGCCGGC CGTCTGGCCC GCCGTCCACG AGCGGGCGAT GGAGCGCCTC
ACCGAGCTCA CCGGCCTGGT GCCGGTGGAG TACCCGACGA CGCGTCGGCT CGGCGCCGAC
TCGCGTGACC GCGCCGCCGA CCTGATGGCC GCCTTCGCCG ACCCGTCGAT CCGTGCCGTG
CTGTCCACGG TGGGTGGGGA CGACCAGGTG CGGGTGGTCG GCCACCTGGA CCCCGAGGTG
GCCCGTGCCG ACCCCAAGCC CTTCCTCGGG TACAGCGACA ACACCAACCT CCTGGCCTGG
CTGCACGCCG CCGGCGTCGC GGCCTTCCAC GGCGGCTCCA CCCAGGTGCA CCTCGGGGCC
GGCCCCGCCG TCGATGCCGT GCACTCCGCA TCGCTGCGGG CGGCCCTGCT CACCGGCGAG
CGCCTGGAGG TCACCGAGCC CGGCGAGTCC GAGGACTTCG GGCCGGACTG GGCCTCCCCG
GAGGCGCTGA CGCAGTTCGG GGAGCGCGAG CCGGCCCCGG CGTGGGTCTG GTCCGGGCCG
CGCCGCGTGG TGACCGGTCC CACCTGGGGC GGCAACATCG AGGTCCTGGC CTGGGTGGCC
CTGGCCGGGC GGCTGACCGT CACCGCCGAG GACCTGGCCG GCGGCGTGCT GCTGGTGGAG
ACCAGCGAGG AGGTGCCCCC ACCGCACGCG GTCGCCCGGA ACCTCGAGGC GCTGGCCCAG
CGGGGGCTGC TCGAGGCCGT CGAGGCCGTG GTGCTGGCCC GCCCGGCCAC CTCGAACCAC
GAGCACGTGC CCTCGGCCGA GGAGCGCGCC GCCCATCGCG GGCAGCTCAC GGAGGCGGTC
TGCGAGGTCG TCACGCGGCA CAACGACCGG GCCGTCGTCG TCTCGGGCGT GCCCTTCGGC
CACACCCGGC CGCACTGGAT CCTGCCCTTC GGCGGCCGGA TGACGATCGA CGGCGAGGAG
CAGCGGGTCT GGGCCGACTA CGCCTGA
 
Protein sequence
MTSLLHPPKA RPGDRVAVLS PSFAAPAVWP AVHERAMERL TELTGLVPVE YPTTRRLGAD 
SRDRAADLMA AFADPSIRAV LSTVGGDDQV RVVGHLDPEV ARADPKPFLG YSDNTNLLAW
LHAAGVAAFH GGSTQVHLGA GPAVDAVHSA SLRAALLTGE RLEVTEPGES EDFGPDWASP
EALTQFGERE PAPAWVWSGP RRVVTGPTWG GNIEVLAWVA LAGRLTVTAE DLAGGVLLVE
TSEEVPPPHA VARNLEALAQ RGLLEAVEAV VLARPATSNH EHVPSAEERA AHRGQLTEAV
CEVVTRHNDR AVVVSGVPFG HTRPHWILPF GGRMTIDGEE QRVWADYA