Gene Ksed_23980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_23980 
Symbol 
ID8373901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2481687 
End bp2482826 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content72% 
IMG OID644992626 
ProductDNA repair exonuclease 
Protein accessionYP_003150130 
Protein GI256826170 
COG category[L] Replication, recombination and repair 
COG ID[COG0420] DNA repair exonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value0.289668 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.90712 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTCT TGCAGACCAG TGACTGGCAG TGGGGCATGA CCCGGCACTG GCTCGACGCC 
GACGACCAGG CCCGTTTCAC CCAGGCCCGG AACGATGCGG TGGTGCGGGC GGGGCGGGTG
GCACAGGAGC ACGACTGCGC GTTCATGGTG GTGGCCGGGG ACGTGTTCGA CTCCAACCAC
CTGCGGCCAC AGACCGTGCG GCGGGCGATG GAGGCCCTGC GGCAGGTGCC GGTTCCGGTA
TACCTGCTGC CCGGCAACCA CGACGCGCTC AATGTCGCCG CCGTGTACGA CTCCCCGGCC
TTCACCGGGG TGGGGCTCGA GCACGTGCAC GTGCTGCGCT CGAGCGAGCC GGTGGAGGTG
GCCCCGGGGG TGGAGCTGGT GGCGGTCCCG CTGACCACGA ACCAGCCCGA CCATGACGTG
GTGGCGGCGG TGCTCGACGA CCTGGAGCCC CCGGCACCGG GGGTGCGCCG GGTGCTGGTG
GCGCACGGGC AGCTGCTCGA GCTCGACCCG GGGCGGCGCG TTTCGGCGTT GGATGGGGAC
CGCATCCGAC AAGCGCTGGA CGAGGGCCTG GTCGACTGGG TGGCCCTGGG CGACCGGCAC
TCCCGCTGGG CGGACCCCAG CGGCCGCATC CACTACTCCG GGGCGGTGGA GGTCACCGAC
TTCCGTGACG AGGTCCCCGG GGACGTGCTG GTGGTGGACC TGGGCGAGGA GGGCCGGGCG
CCGGCGGCCG AGCCGGTGCA CGTCGGCACC TGGCGGATGC TGGGGGTGAC CGAGGAGGTC
AACTCCGCCG AGGACGTGGC GCGCCTGCGC GAGCAGTGGG AGGCGATCGA GGACAAGTCG
TCGGTCCTCA TCCGCCACGC GCTGACGGGC ACGTTGTCGC TGACCGACGA CGCGGCACTG
CAGGAGCTGC TCGAGTGGGC GGGTGACACG TTCGCGGCAG CGTTCGCCTG GGAGCGGCAC
ACCGACGTGG TGGTGGTGCC GGATGACGCC GAGCTGTCCG ACATCGGGAT CGGCGGGTAC
GTGGCGCAGG CGGCCGCGGA CCTCAAGGAA CAGACGGAGT CCGGTGGGGA GGGTGCAGCG
GCCGCGTCGG ACGCCCTGCG CCTGCTCTAC CGGTACGCGA CGGCAGGGGA GCGAGCATGA
 
Protein sequence
MKFLQTSDWQ WGMTRHWLDA DDQARFTQAR NDAVVRAGRV AQEHDCAFMV VAGDVFDSNH 
LRPQTVRRAM EALRQVPVPV YLLPGNHDAL NVAAVYDSPA FTGVGLEHVH VLRSSEPVEV
APGVELVAVP LTTNQPDHDV VAAVLDDLEP PAPGVRRVLV AHGQLLELDP GRRVSALDGD
RIRQALDEGL VDWVALGDRH SRWADPSGRI HYSGAVEVTD FRDEVPGDVL VVDLGEEGRA
PAAEPVHVGT WRMLGVTEEV NSAEDVARLR EQWEAIEDKS SVLIRHALTG TLSLTDDAAL
QELLEWAGDT FAAAFAWERH TDVVVVPDDA ELSDIGIGGY VAQAAADLKE QTESGGEGAA
AASDALRLLY RYATAGERA