Gene Ksed_23720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_23720 
Symbol 
ID8373875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2457556 
End bp2458599 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content67% 
IMG OID644992602 
ProductDNA-binding domain-containing protein, AraC-type 
Protein accessionYP_003150108 
Protein GI256826148 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTCATG ACTGCGTCAA AGTTATCGTC GTCAGGGATG GCAGCGCGAT CCTGTTCAGC 
GAGTTCGGAC AGCAGGCGGT CCGGCCGGGC GATGTGGTGG TGCTGGCGCC GAGTACCTTG
TGCGGCTCCG AGCCCGAAGG GCACATCACC GTCACCACGA TCTACGCCGA TACCGACTAC
GTGATCGACC AGGCGTTCTG GCAGCACGTC GGCATCTTGC ACTACCGGCT CGATGCAAGG
GGCTTCGCGG AGAAGGTCTA CTCCGATCCA GCGCAGATCC TGCGCCTCGG TGAGGACCGC
ACGGGCATGA TGATGGCGTG GCTGGATGAG ATGGTCGCGC TCAGCCTCGA CGGGCAGTTC
CAGCGCCGAT TCCATCGGCT GCAAGCGCTC TGGTTCGCGA TCATGGACGT GGTCGCCCCC
TATGTCCGCA TCTCCCCCGT ACGGTTGACG CCGTTGCAGC GAGCACGCTC GCGCCCGGCG
CCGCCGCGCA CTCGACGGTT CACGCCGCTG CGCCGAGAAG CGCTGCTCGC GCGCGAAGCA
CTCCACGAGC ACATCGCGCA TTCGTGGACG CTGCGTGAGC TGGCCGAATC GGTGCGGCTT
TCCCCGCAGC AGCTCACGCG GGTGTTCGCC GACGCGTACG GCAAGACGCC GATCGCGTAT
CTCACGATGC TGCGCGTGCA GGATATGGCC CGGCTACTGC GCGAGACTGA CCAGCCCGTC
GCCGTCACGG GGCGGCAGGT CGGGTGGTCC AGCCGCTCGC GGGCGACCGA AGCGTTCATC
GAGCATGTCG GGATCAGTCC GAGCCGCTAC CGCGCCATGC GCCACGTCGT CGGTCCAGTC
GAACTCGTCT TGATGACCAG GCGTGGCGAG GGGCGGTTCG TAGAGCGCGA GGGCGCGGAC
GATGTTCGGG TCGAGCTGCG CGGCTCTCAG GGCGATGAGC GCGCCGCTGG AGAGGCCGAA
CAGGTGGTGT GCGTTCATGG CCTTGGCGAC GGCGACCACA TCTTCAGCTT CAGCATCGAG
GCCCTCTGCG GGTGCGATGT CTGA
 
Protein sequence
MAHDCVKVIV VRDGSAILFS EFGQQAVRPG DVVVLAPSTL CGSEPEGHIT VTTIYADTDY 
VIDQAFWQHV GILHYRLDAR GFAEKVYSDP AQILRLGEDR TGMMMAWLDE MVALSLDGQF
QRRFHRLQAL WFAIMDVVAP YVRISPVRLT PLQRARSRPA PPRTRRFTPL RREALLAREA
LHEHIAHSWT LRELAESVRL SPQQLTRVFA DAYGKTPIAY LTMLRVQDMA RLLRETDQPV
AVTGRQVGWS SRSRATEAFI EHVGISPSRY RAMRHVVGPV ELVLMTRRGE GRFVEREGAD
DVRVELRGSQ GDERAAGEAE QVVCVHGLGD GDHIFSFSIE ALCGCDV