| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_23270 |
|---|
| Symbol | |
|---|
| ID | 8373830 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | + |
|---|
| Start bp | 2415863 |
|---|
| End bp | 2417155 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644992561 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003150067 |
|---|
| Protein GI | 256826107 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2508] Regulator of polyketide synthase expression |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACAC CCCCCGAGGG CCCCACGGAG CAGGCCACCG ATCCCGCCGC AGCGCCAGCC
ACCGAGCACC CCGCCGGGGA CCCGCTCTGG ACGCCGGCCG TGGTCGCCGA CCTGCGCGCC
GCGGTGGAGG ACGCCTCCCA GCAGAGCGTG AGGGCCATCA TGGAGGACGT GGTCGTGTAC
TCCGAGGAGT TCCGCCACGG CCGCTCGGCA GTGCTCAAGG AGGCGGTGTC GATGGCGCTG
CACGGTTTCC TGGACCTCAT CGAGGCCCCC GGCCCCTCCA CCGGTCCCAC CTTGGCCACC
ACCCTGGGCG CGCGCTCGCT GGGCCGCTCC GAGGCGCGTG CGGGGCGCTC GGTGGAGGCG
GTGCTGGCGG CCTACCGGGT GGGCGCGCGC GTGTGCTGGG TGACCTTCTC CGACGTGGCG
CTGGACCACG GCTTCGTCGC CCGGGACCTG CAGACCTTCG CCGCGCTGAC CTTCGCGTAC
ATCGACGACC TCTCGGCCGC CACCGTGGCC GGCCACACCG AGGAGCGCTC CCGGGCCGAC
CAGCAGCGCA GCCAGGCCCG CACCAACCTG GGCCTGTTGA TCCTGCGTGG CGCTCGCGCC
GCCGAGGTGG ACCAGTACGC GCGCGCCGCC GAGCTGACCA CCCCGCGTGA GGTGGGCATG
GTGCTCTGCC GGGCCGAGGA CACCGGGGCC CTCACCTCCC GCCTGCCGCT GCGCACGCTG
GTGATCGACC AGGTGGGCCT GGGGCCGGAG GGCTCGGGCT GGAGCACCCT GGTGCTGCCC
GACCCCTCCG AGGCCGAGTG GACCCGCGCC CGCACCGGGA GCCGGGACGC GGGCATCCGC
TGCCTGGTCA CGCCGGTGGT GGACCGCGCC GACGCCCCGG ACACCTGGCG CCTTGCCTCC
CGCTGGGTGG TCGTCCCGCC CGACCCGATG GCGGACGCCC CCGGCCCCCA GGAGCTCGTG
GACGTGCTGC CGCACCTGGT GGTGCACGGC GATGCGGTGG CCGCCGCCGC GCTGGCCACG
AGCGCCCTCG CCCCGCTCGA TGAGGTGGAC CCCTCCGCCC GCGAGCGCCT GGTGGAGACC
CTGCGGTTGT GGATGTTGCT GCGTGGCCAG CGCTCCCTGG TGGCCGAGCA GCTGGGGGTG
CACCCGCAGA CCGTGCGCTA CCGGATGACC CAGGTGCGTG AGCTGTTCGG GGAGGAGCTC
GACGACCCCC GGCAGGCGGC GGCCATTCTG CTGGCCACGC TGGTCAGCCC GGCGACCGGG
CCGTCCCCCG ACGGCAGTGC CGCCAGGGGC TGA
|
|---|
| Protein sequence | MSTPPEGPTE QATDPAAAPA TEHPAGDPLW TPAVVADLRA AVEDASQQSV RAIMEDVVVY
SEEFRHGRSA VLKEAVSMAL HGFLDLIEAP GPSTGPTLAT TLGARSLGRS EARAGRSVEA
VLAAYRVGAR VCWVTFSDVA LDHGFVARDL QTFAALTFAY IDDLSAATVA GHTEERSRAD
QQRSQARTNL GLLILRGARA AEVDQYARAA ELTTPREVGM VLCRAEDTGA LTSRLPLRTL
VIDQVGLGPE GSGWSTLVLP DPSEAEWTRA RTGSRDAGIR CLVTPVVDRA DAPDTWRLAS
RWVVVPPDPM ADAPGPQELV DVLPHLVVHG DAVAAAALAT SALAPLDEVD PSARERLVET
LRLWMLLRGQ RSLVAEQLGV HPQTVRYRMT QVRELFGEEL DDPRQAAAIL LATLVSPATG
PSPDGSAARG
|
|---|
| |