Gene Ksed_23250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_23250 
Symbol 
ID8373828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp2413279 
End bp2414637 
Gene Length1359 bp 
Protein Length452 aa 
Translation table11 
GC content69% 
IMG OID644992559 
Productfatty acid desaturase 
Protein accessionYP_003150065 
Protein GI256826105 
COG category[I] Lipid transport and metabolism 
COG ID[COG3239] Fatty acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.183691 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGA CTCCCATCCG ACGCACGCAG AACGCGACGA CCCGCCCCGG ACTGGGCGGC 
TCCCGGCTGA AGCCGCAGGC GTTCAGCGAC GCGATGCGCG TGAACAAGCA GTTCGCCCGC
ACCCGCCGCG ACACCCGCCG CGGGGTCAAC CGCATCACGT CCACGGAGAA CCCCGAGCGC
CACTGGAAGC CGAAGCGATC CGGCGGCGAC GACCCGGCCG CGCACCTGAC GATCGAGCAG
ATCGAGGAGC TGGGGCGGGA GCTCGACGCG CTGCGCCAGG GCGTCATCGA CTCGCGCGGG
GCCCGTGATG CGGCGTACAT CCGCCGCGTG ATCGCCACCC AGCGTGCGCT GGACCTGGGC
GGTCGCCTGG TGCTGATGGT GGGCAGCCGC ACCAAGGCCG GCTTCGTGCT GGGCACCGGG
GCGCTCACCG TGGCCAAGAT CCTGGAGAAC ATGGAGATCG GCCACAACAT CCTCCACGGC
CAGTGGGACT GGATGCGGGA CCCGAAGATC CACTCGTCCA CCTGGGAGTG GGACCACGCG
TCCCCCGCCG AGGCGTGGAA GCACTCGCAC AACGACCTGC ACCACACGTA CACGAACGTG
ATCGGGCGGG ACAACGACCT GGGCTTCGGC ATCGCGCGGG TGGACCCGGA CCAGCCGTGG
AAGCCGTGGA TGGTGTGGCA GCCGGTGCTG AACGCCATCA ACGCGGTGAC CTTCGAGTAC
TCCATCGCGC TGTACGACCT GGAGCTTGGC CGGTACCAGG GCAAGCCGCT CAAGGCGTGG
AAGCCCGCCG TCCCCGGCCT GGTGGCCGTG GGCAAGAAGG TCGCCAAGCA GATGGGCAAG
GACTACGTGG TGACGCCGGC GCTGAGCGGG CCGAACTGGA AGTCCACGCT GTTGGCCACC
TGGACGGCCA ACCTGGCCCG CAACCTGTGG AGCAACGGCG TGATCCTGTG CGGTCACTTC
CCCGACGGGG TGCAGACCTT CAGCCGTGCC TCGACCGTGG GCGAGACCCG TGGTGAGTGG
TACCTGCGGC AGATGTTGGG TTCGGCGAAC ATCTCCGGCT CGCCGCTGAT GCACATCATG
ACCGGCAACC TGAGCCACCA GATCGAGCAC CACTGCTTCC CGGACCTGCC GAGCAACCGG
TACGCCGAGG TGGCGCCGCA CATGCGGGAC ATCTTCGACC GGTACGGCTT CGACTACGTG
ACCGGTCCGC TGCCGGTGCA GTTGGCCAGC GCGTGGGGCA AGATCTTCCG CTACGCGCTG
CCGAACGGGC AGTGGGAGAC GGTGCGCCGC CAGCCGGTGC GCTCCGTGCT GGCCGGGGCC
CGCTGGGCCG TGAAGCAGGC CCTGCCCGGC AACCGCTGA
 
Protein sequence
MTTTPIRRTQ NATTRPGLGG SRLKPQAFSD AMRVNKQFAR TRRDTRRGVN RITSTENPER 
HWKPKRSGGD DPAAHLTIEQ IEELGRELDA LRQGVIDSRG ARDAAYIRRV IATQRALDLG
GRLVLMVGSR TKAGFVLGTG ALTVAKILEN MEIGHNILHG QWDWMRDPKI HSSTWEWDHA
SPAEAWKHSH NDLHHTYTNV IGRDNDLGFG IARVDPDQPW KPWMVWQPVL NAINAVTFEY
SIALYDLELG RYQGKPLKAW KPAVPGLVAV GKKVAKQMGK DYVVTPALSG PNWKSTLLAT
WTANLARNLW SNGVILCGHF PDGVQTFSRA STVGETRGEW YLRQMLGSAN ISGSPLMHIM
TGNLSHQIEH HCFPDLPSNR YAEVAPHMRD IFDRYGFDYV TGPLPVQLAS AWGKIFRYAL
PNGQWETVRR QPVRSVLAGA RWAVKQALPG NR