| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_23220 |
|---|
| Symbol | |
|---|
| ID | 8373825 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | + |
|---|
| Start bp | 2409091 |
|---|
| End bp | 2410485 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 644992556 |
|---|
| Product | phytoene dehydrogenase-like oxidoreductase |
|---|
| Protein accession | YP_003150062 |
|---|
| Protein GI | 256826102 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTCC GGCCCGGCCT CACGCGGGTG CCGCTGCGCA CGGCGGACGC GGACGTCATC
GTGGTGGGCG CCGGGGTGGC CGGCCTGGCG GCGGCCGCGC AGCTGACCGC GGCCGGGCGG
CACGTGGAGG TGCTGGAGCA GGACGTGACG GTCGGGGGCC GGGTGGGGTC CTCGCTCGTC
GACGGGTTCA CGGTGGACCA CGGTTTCCAC CTGGTCTACC CACGACCGGA GGGCCTGGCG
GGGCTGGTGG GCCTGGAGGA CCTGGACCTG CACCCGCTGC TGCCGGGGCT GGACCTGCTG
CTGGGTAGCG ACGCGCACGG GTCCGAGGTG CGGACCGTGG CCGACCCACG ACGTGCACCG
GGACGGCTGG TCTCCACGCT GCGGGCGGGC CTGCGCGCGC ACGACCTGCA CAGCGCCCGC
GAGGTGTGGT CCCTGCTGCG CTGGGCCCGG GCCGCCGAGG CCGCGGGCGA CGACCTGCCG
TGGCCGCAGG CGCTGGCGGC CGGGGGCCTG CAGGGGCGCC CCGCGCTGGT GGCCGAGCGA
CTTCTGACGG CCATGCTGCT GGAGGACCCC GGTGGGCGCA GTGGGGGCAG CGGCAGTGCG
GACATCGGGA ACGGTGGGCG CAGTGGAAAC AGCGCAGCCA TCGGGGGCAG CGGGGGCAGC
GCCGCATCGG ATGGGAGGAC GGCGCGGGAG AGGTTGCGCG CCTTCCTGCA CGCGGCACCG
GCCCTGCCTG CACACGGCAT GGTCGCGCTC CCGGTGCACC TGGTAGGCCA CCTGGAGCGG
CCGGTGCACA CCGGTTCCCG GGTCGATGCG GTGCGCCGCC GGGGCGGTTC GTGGGTGGTG
GTGGGCGACC ACGGCACGTG GAGCGCTCCA CAGGTGGTGC TGGCCACGCC AGCCGGGGTC
AGTGCGGACC TGCTCCACGG CTCGGGGGTG GACCTCCCAC TGCCGCACCA GCAGTGGCAC
GGCGTGACCA CCTGGTGGTT CACCGCCGAC GAGGCGCCCA GTGGGTCGAC GGCCCTGCGG
CTGGACGCGC GGCCCCATCG CGGCCCGGTG GCGGCGACGG CCGTGGTGAC CAACGTGTCC
CCGGCCTACT CGGCGGACGG GCGGCCGCTC ATCGCGGCGC TGGTGCTGCA CCGCAACGGC
CACCCGGAGG GGCAGGAGGC GGCCGTGCGG GTGCACCTGT CCGAGCTGTG GGGGACGCCG
GCTTTCGGCT GGGAGGTGGT GGCCCGGCAG GACCAGGCCC ACGGGGTGCC GGTGCGTCCC
GCGGCGAGCG CGGGGCTGCC CGGTGCCGAT GCTCCGCCCG GACTGTTCCT GGCCGGCGAC
CACCTGGACC CCGGGATCAC CGGTGCCATG GAGTCCGGTG TCCGGGCCGC GGCCGACGCC
CTGCGCGCCC GGTGA
|
|---|
| Protein sequence | MTVRPGLTRV PLRTADADVI VVGAGVAGLA AAAQLTAAGR HVEVLEQDVT VGGRVGSSLV
DGFTVDHGFH LVYPRPEGLA GLVGLEDLDL HPLLPGLDLL LGSDAHGSEV RTVADPRRAP
GRLVSTLRAG LRAHDLHSAR EVWSLLRWAR AAEAAGDDLP WPQALAAGGL QGRPALVAER
LLTAMLLEDP GGRSGGSGSA DIGNGGRSGN SAAIGGSGGS AASDGRTARE RLRAFLHAAP
ALPAHGMVAL PVHLVGHLER PVHTGSRVDA VRRRGGSWVV VGDHGTWSAP QVVLATPAGV
SADLLHGSGV DLPLPHQQWH GVTTWWFTAD EAPSGSTALR LDARPHRGPV AATAVVTNVS
PAYSADGRPL IAALVLHRNG HPEGQEAAVR VHLSELWGTP AFGWEVVARQ DQAHGVPVRP
AASAGLPGAD APPGLFLAGD HLDPGITGAM ESGVRAAADA LRAR
|
|---|
| |