| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ksed_22930 |
|---|
| Symbol | |
|---|
| ID | 8373796 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Kytococcus sedentarius DSM 20547 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013169 |
|---|
| Strand | + |
|---|
| Start bp | 2377311 |
|---|
| End bp | 2378795 |
|---|
| Gene Length | 1485 bp |
|---|
| Protein Length | 494 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644992529 |
|---|
| Product | amino acid transporter |
|---|
| Protein accession | YP_003150035 |
|---|
| Protein GI | 256826075 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0974202 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGA TGAAGAAGTC ACTGGGCCTG TTTCAACTGC TGGCACTGGG TGTGGCCGGC
GTGTTGGGCT CCAGCTGGAT CTACACCAAC TCCACTTTCT TCGACACCTA CGGTGCCGGC
GGCATGATCC TGGGCATCGC CCTGGGTGGC GTGCTGGCCG CCATGGTGGC GCTGGCCTAC
AGCGAGCTGA CCACCCTCTT CCCCCGCGCC GGCGGTGAGG TGGTCTTCAG CTACACCGCG
TTGGGTCGTG TGGCCGGCTT CGTCGCGGGG TGGATGCTCA TCGGCGCCTA CCTCTCCTCC
ACCGCCTTCT ACGTGACGGC CTTCGGCACG CTGCTGGGCA AGTTCACCGA CGCCATGAAC
GCCTCGCCCC TTTACACCAT CAACGAGGGT GTGGTGACCG CCCCGGTGCT GGCCGCGGGC
GTGGCGCTGA CACTGCTGAT GTTTGCCCTC AACTGGTTCG GCGTGGGCAT CGGCGCCCAG
GTGCAGGTAC TCATGTTCGT GGTGATGGTG CTCATCGGCC TGGCGCTCAT CATGGTGGGC
TTCGCCGCGG GCTCCCCGGA CAACTTCCTG CCCGCCTTCC GCGACGACCA CGACCCCCTC
ATGTCCACGC TGCGCATGGT GGTACCCGGC ATGACCTACG TGGTCGGCTT CGGGCTGGTG
GCCGTGCTGG CCGAGGACGC CGACATGCCG CCCCGCAAGA TCGGCCAGGC CGTGCTCATC
ACCGTGGTGG TGGCAGTGGT TTTCTACTGC CTCGTGCTGC TGGCCAGCGC CTGGGTGATC
CCCTGGGAGC AGACGGCCGG CATGGAGCTG GGCTCCATCG ACGCCTTCCG TGAGGCCGGG
TTCCCGCTGC TCGGCTGGGG CGCCTATGCC ATCGGGATGT TGGGCCTGCT CACCAGCTTC
CTGGGCCTGT TCATCGCGAC CTCCCGGATC ATCGTGGGCA TGGCCCGCGT ACGACTCCTG
CCGGCCTCCT TGGCGCGCGT GCACGAGGGC TCCGGCGCCC CGCGCAACGC CCTGGTGGCC
GTGCTGGTGG CCACCCTGGC CCTCGGCCTG CTGGGCCCCG GCGCCATCCT GTGGTTCCTG
GACACCGGCG GCATCTACCT GGGCATCGTG TGGATCCTGG TGGTGGCCGC CAAGTACGCG
CTCCCCCGCA AGTACCCCGG ACTGCAGCGC GCCTACGAGG CGCCCGGTTG GGCGCCCGTG
CTCGGCGCGG CGGGTGCAGC GGCGGTCATC TGCCTAGCCC TGGTCCCCGG AACGAACATG
TCGTTGGTGT GGCCGGGTGA GTACATCGTG CTGCTGGCGT GGTTCGCGCT CGGCGCGGTG
CTGCTGTCGG TGGCCGGGCG CATGGATCGC GACGCGGCCC TCACCGAGCT GCTCGGCGAC
TACCGCCACC AGCTGGCCCA GGCGCAGGAG CTCCAGAGCG GTCAGGACGG CTCGGCGCGT
GCGTCCGGAG GCGCGGATGA ACGGGGTCTG CGTGACCGGG GCTGA
|
|---|
| Protein sequence | MSEMKKSLGL FQLLALGVAG VLGSSWIYTN STFFDTYGAG GMILGIALGG VLAAMVALAY
SELTTLFPRA GGEVVFSYTA LGRVAGFVAG WMLIGAYLSS TAFYVTAFGT LLGKFTDAMN
ASPLYTINEG VVTAPVLAAG VALTLLMFAL NWFGVGIGAQ VQVLMFVVMV LIGLALIMVG
FAAGSPDNFL PAFRDDHDPL MSTLRMVVPG MTYVVGFGLV AVLAEDADMP PRKIGQAVLI
TVVVAVVFYC LVLLASAWVI PWEQTAGMEL GSIDAFREAG FPLLGWGAYA IGMLGLLTSF
LGLFIATSRI IVGMARVRLL PASLARVHEG SGAPRNALVA VLVATLALGL LGPGAILWFL
DTGGIYLGIV WILVVAAKYA LPRKYPGLQR AYEAPGWAPV LGAAGAAAVI CLALVPGTNM
SLVWPGEYIV LLAWFALGAV LLSVAGRMDR DAALTELLGD YRHQLAQAQE LQSGQDGSAR
ASGGADERGL RDRG
|
|---|
| |